About Paelopatides sp. Yap

The hadal sea cucumber Paelopatides sp. Yap is a species of hadal sea cucumber in the family Stichopodidae, collected from the Yap Trench in the western Pacific Ocean. This species is adapted to the extreme conditions of the hadal zone, thriving at great depths where pressures are immense and temperatures are near freezing. Its discovery contributes to our understanding of biodiversity and ecological dynamics in one of the least explored regions of the deep sea.

Classification

Animalia Kingdom; Echinodermata (Phylum); Holothuroidea (Class); Stichopodidae (Family); Paelopatides (Genus); Paelopatides sp. Yap (Species)


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Paelopatides sp. YapEchinodermataPaelopatides sp. YapDeep sea6,633Yap Trench at 8°1′22"N; 137°50′41"E-

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completeness (%)Scaffold/Contig N50 (kb)GC content (%)Repeat Rate (%)Gene Number
-3.7GbContig2020-Fujian Agriculture and Forestry UniversityPRJCA00378989.40 137.138.1976.0657,522

References
TitleJournalPubmed ID
The genome of a hadal sea cucumber reveals novel adaptive strategies to deep-sea environmentsiScience36444293

Gene Information

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Gene IDDescription
Paelopatides29235CONDENSIN-2 COMPLEX SUBUNIT G2
Paelopatides29236CONDENSIN-2 COMPLEX SUBUNIT G2
Paelopatides29237-
Paelopatides29238TRANSMEMBRANE PROTEIN 59-LIKE PROTEIN
Paelopatides29239REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN
Paelopatides29240PARANEOPLASTIC ANTIGEN
Paelopatides29241POL PROTEIN
Paelopatides29242ENDONUCLEASE-RELATED
Paelopatides29243PHD-TYPE DOMAIN-CONTAINING PROTEIN
Paelopatides29244PHD-TYPE DOMAIN-CONTAINING PROTEIN
Paelopatides29245DYNACTIN 1-RELATED MICROTUBULE-BINDING
Paelopatides29246COILED-COIL DOMAIN-CONTAINING PROTEIN 24
Paelopatides29247OS05G0521000 PROTEIN
Paelopatides29248-
Paelopatides29249TUMOR SUSCEPTIBILITY GENE 101 PROTEIN-RELATED
Paelopatides29250-
Paelopatides29251REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN
Paelopatides29252GALACTOSE-3-O-SULFOTRANSFERASE
Paelopatides29253TRANSPOSON TY3-I GAG-POL POLYPROTEIN
Paelopatides29254MAINTENANCE OF TELOMOERE CAPPING
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