About Paelopatides sp. Yap

The hadal sea cucumber Paelopatides sp. Yap is a species of hadal sea cucumber in the family Stichopodidae, collected from the Yap Trench in the western Pacific Ocean. This species is adapted to the extreme conditions of the hadal zone, thriving at great depths where pressures are immense and temperatures are near freezing. Its discovery contributes to our understanding of biodiversity and ecological dynamics in one of the least explored regions of the deep sea.

Classification

Animalia Kingdom; Echinodermata (Phylum); Holothuroidea (Class); Stichopodidae (Family); Paelopatides (Genus); Paelopatides sp. Yap (Species)


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Paelopatides sp. YapEchinodermataPaelopatides sp. YapDeep sea6,633Yap Trench at 8°1′22"N; 137°50′41"E-

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completeness (%)Scaffold/Contig N50 (kb)GC content (%)Repeat Rate (%)Gene Number
-3.7GbContig2020-Fujian Agriculture and Forestry UniversityPRJCA00378989.40 137.138.1976.0657,522

References
TitleJournalPubmed ID
The genome of a hadal sea cucumber reveals novel adaptive strategies to deep-sea environmentsiScience36444293

Gene Information

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Gene IDDescription
Paelopatides29255KDEL LYS-ASP-GLU-LEU CONTAINING - RELATED
Paelopatides29256TYROSINE-PROTEIN KINASE
Paelopatides29257REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN
Paelopatides29258-
Paelopatides29259PROTEIN CBG26694
Paelopatides29260CTX-RELATED TYPE I TRANSMEMBRANE PROTEIN
Paelopatides29261-
Paelopatides29262-
Paelopatides29263-
Paelopatides29264WD REPEAT-CONTAINING PROTEIN 43
Paelopatides29265-
Paelopatides2926639S RIBOSOMAL PROTEIN L33, MITOCHONDRIAL
Paelopatides29267GLUCOSAMINE 6-PHOSPHATE N-ACETYLTRANSFERASE
Paelopatides29268REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN
Paelopatides29269COMPLEX I INTERMEDIATE-ASSOCIATED PROTEIN 30
Paelopatides29270-
Paelopatides29271SLR5058 PROTEIN
Paelopatides29272TESTOSTERONE-REGULATED PROTEIN RP2
Paelopatides29273PHOSPHATE TRANSPORTER
Paelopatides29275SEPIAPTERIN REDUCTASE
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