About Paelopatides sp. Yap

The hadal sea cucumber Paelopatides sp. Yap is a species of hadal sea cucumber in the family Stichopodidae, collected from the Yap Trench in the western Pacific Ocean. This species is adapted to the extreme conditions of the hadal zone, thriving at great depths where pressures are immense and temperatures are near freezing. Its discovery contributes to our understanding of biodiversity and ecological dynamics in one of the least explored regions of the deep sea.

Classification

Animalia Kingdom; Echinodermata (Phylum); Holothuroidea (Class); Stichopodidae (Family); Paelopatides (Genus); Paelopatides sp. Yap (Species)


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Paelopatides sp. YapEchinodermataPaelopatides sp. YapDeep sea6,633Yap Trench at 8°1′22"N; 137°50′41"E-

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completeness (%)Scaffold/Contig N50 (kb)GC content (%)Repeat Rate (%)Gene Number
-3.7GbContig2020-Fujian Agriculture and Forestry UniversityPRJCA00378989.40 137.138.1976.0657,522

References
TitleJournalPubmed ID
The genome of a hadal sea cucumber reveals novel adaptive strategies to deep-sea environmentsiScience36444293

Gene Information

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Gene IDDescription
Paelopatides29544-
Paelopatides29545IONOTROPIC GLUTAMATE RECEPTOR
Paelopatides29546VWFA DOMAIN-CONTAINING PROTEIN
Paelopatides29547G PROTEIN-COUPLED RECEPTOR 157-RELATED
Paelopatides29548OSMOTIC AVOIDANCE ABNORMAL PROTEIN 1/WD REPEAT MEMBRANE PROTEIN
Paelopatides29549RETROTRANSPOSON
Paelopatides29550-
Paelopatides29551TRANSPOSON TY3-I GAG-POL POLYPROTEIN
Paelopatides29552STROMAL INTERACTION MOLECULE HOMOLOG
Paelopatides29553STROMAL INTERACTION MOLECULE HOMOLOG
Paelopatides29554-
Paelopatides29555-
Paelopatides29556-
Paelopatides29559-
Paelopatides29560TRANSPOSABLE ELEMENT-RELATED
Paelopatides29561TRANSPOSABLE ELEMENT-RELATED
Paelopatides29562BUCENTAUR RELATED
Paelopatides29563-
Paelopatides29564CELLULAR TUMOR ANTIGEN P53
Paelopatides29565DNAJ HOMOLOG SUBFAMILY C MEMBER 13
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