About Paelopatides sp. Yap

The hadal sea cucumber Paelopatides sp. Yap is a species of hadal sea cucumber in the family Stichopodidae, collected from the Yap Trench in the western Pacific Ocean. This species is adapted to the extreme conditions of the hadal zone, thriving at great depths where pressures are immense and temperatures are near freezing. Its discovery contributes to our understanding of biodiversity and ecological dynamics in one of the least explored regions of the deep sea.

Classification

Animalia Kingdom; Echinodermata (Phylum); Holothuroidea (Class); Stichopodidae (Family); Paelopatides (Genus); Paelopatides sp. Yap (Species)


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Paelopatides sp. YapEchinodermataPaelopatides sp. YapDeep sea6,633Yap Trench at 8°1′22"N; 137°50′41"E-

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completeness (%)Scaffold/Contig N50 (kb)GC content (%)Repeat Rate (%)Gene Number
-3.7GbContig2020-Fujian Agriculture and Forestry UniversityPRJCA00378989.40 137.138.1976.0657,522

References
TitleJournalPubmed ID
The genome of a hadal sea cucumber reveals novel adaptive strategies to deep-sea environmentsiScience36444293

Gene Information

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Gene IDDescription
Paelopatides29567-
Paelopatides29568GALACTOSE-3-O-SULFOTRANSFERASE
Paelopatides29569EPM2A-INTERACTING PROTEIN 1
Paelopatides29570DIHYDROOROTATE DEHYDROGENASE (QUINONE), MITOCHONDRIAL-RELATED
Paelopatides29571CHCHD1
Paelopatides29572TGF-BETA FAMILY
Paelopatides29573PROTEIN CBG26694
Paelopatides29574PROTEIN CBG26694
Paelopatides29575PROTEIN CBG26694
Paelopatides29576CYTOCHROME P450 508A4-RELATED
Paelopatides29577REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN
Paelopatides29578-
Paelopatides29579FIBRONECTIN TYPE-III DOMAIN-CONTAINING PROTEIN-RELATED
Paelopatides29580FIBRONECTIN TYPE-III DOMAIN-CONTAINING PROTEIN-RELATED
Paelopatides29581FIBRONECTIN TYPE-III DOMAIN-CONTAINING PROTEIN-RELATED
Paelopatides29582FIBRONECTIN TYPE-III DOMAIN-CONTAINING PROTEIN-RELATED
Paelopatides29583RAS-ASSOCIATING DOMAIN-CONTAINING PROTEIN
Paelopatides29584-
Paelopatides29585-
Paelopatides29586FAS-ASSOCIATING DEATH DOMAIN-CONTAINING PROTEIN FADD
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