About Paelopatides sp. Yap

The hadal sea cucumber Paelopatides sp. Yap is a species of hadal sea cucumber in the family Stichopodidae, collected from the Yap Trench in the western Pacific Ocean. This species is adapted to the extreme conditions of the hadal zone, thriving at great depths where pressures are immense and temperatures are near freezing. Its discovery contributes to our understanding of biodiversity and ecological dynamics in one of the least explored regions of the deep sea.

Classification

Animalia Kingdom; Echinodermata (Phylum); Holothuroidea (Class); Stichopodidae (Family); Paelopatides (Genus); Paelopatides sp. Yap (Species)


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Paelopatides sp. YapEchinodermataPaelopatides sp. YapDeep sea6,633Yap Trench at 8°1′22"N; 137°50′41"E-

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completeness (%)Scaffold/Contig N50 (kb)GC content (%)Repeat Rate (%)Gene Number
-3.7GbContig2020-Fujian Agriculture and Forestry UniversityPRJCA00378989.40 137.138.1976.0657,522

References
TitleJournalPubmed ID
The genome of a hadal sea cucumber reveals novel adaptive strategies to deep-sea environmentsiScience36444293

Gene Information

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Gene IDDescription
Paelopatides29609MEMBRANE-BOUND LYTIC MUREIN TRANSGLYCOSYLASE F
Paelopatides29610-
Paelopatides29611PHAGE_INTEGRASE DOMAIN-CONTAINING PROTEIN
Paelopatides29612REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN
Paelopatides29613-
Paelopatides29614SULFOTRANSFERASE SULT
Paelopatides29615L1 TRANSPOSABLE ELEMENT-RELATED
Paelopatides29616G-PROTEIN COUPLED RECEPTOR 89-RELATED
Paelopatides29617ENDO/EXONUCLEASE/PHOSPHATASE DOMAIN-CONTAINING PROTEIN
Paelopatides29618-
Paelopatides29619SET DOMAIN-CONTAINING PROTEIN-RELATED
Paelopatides29620-
Paelopatides29621REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN
Paelopatides29622-
Paelopatides29623PHAGE_INTEGRASE DOMAIN-CONTAINING PROTEIN
Paelopatides29624BCL-2 RELATED
Paelopatides29625ENDONUCLEASE-RELATED
Paelopatides29626PARANEOPLASTIC ANTIGEN
Paelopatides296274-HYDROXYPHENYLPYRUVATE DIOXYGENASE
Paelopatides29628-
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