About Paelopatides sp. Yap

The hadal sea cucumber Paelopatides sp. Yap is a species of hadal sea cucumber in the family Stichopodidae, collected from the Yap Trench in the western Pacific Ocean. This species is adapted to the extreme conditions of the hadal zone, thriving at great depths where pressures are immense and temperatures are near freezing. Its discovery contributes to our understanding of biodiversity and ecological dynamics in one of the least explored regions of the deep sea.

Classification

Animalia Kingdom; Echinodermata (Phylum); Holothuroidea (Class); Stichopodidae (Family); Paelopatides (Genus); Paelopatides sp. Yap (Species)


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Paelopatides sp. YapEchinodermataPaelopatides sp. YapDeep sea6,633Yap Trench at 8°1′22"N; 137°50′41"E-

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completeness (%)Scaffold/Contig N50 (kb)GC content (%)Repeat Rate (%)Gene Number
-3.7GbContig2020-Fujian Agriculture and Forestry UniversityPRJCA00378989.40 137.138.1976.0657,522

References
TitleJournalPubmed ID
The genome of a hadal sea cucumber reveals novel adaptive strategies to deep-sea environmentsiScience36444293

Gene Information

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Gene IDDescription
Paelopatides29629CENTAURIN-GAMMA-1A
Paelopatides29630CENTAURIN-GAMMA-1A
Paelopatides29631PIGGYBAC TRANSPOSABLE ELEMENT-DERIVED PROTEIN 4
Paelopatides29632-
Paelopatides29633PARANEOPLASTIC ANTIGEN
Paelopatides29634PROTEIN CBG26694
Paelopatides29635-
Paelopatides29636COSTARS FAMILY PROTEIN ABRACL
Paelopatides29637SELENOPROTEIN O
Paelopatides29638N-HYDROXYARYLAMINE O-ACETYLTRANSFERASE
Paelopatides29639TRANSCRIPTASE, PUTATIVE-RELATED-RELATED
Paelopatides29640PHAGE_INTEGRASE DOMAIN-CONTAINING PROTEIN
Paelopatides29641NADH-UBIQUINONE OXIDOREDUCTASE MLRQ SUBUNIT
Paelopatides29642MANNOSE, PHOSPHOLIPASE, LECTIN RECEPTOR RELATED
Paelopatides29643-
Paelopatides29644-
Paelopatides29645-
Paelopatides29646-
Paelopatides2964752 KDA REPRESSOR OF THE INHIBITOR OF THE PROTEIN KINASE-LIKE PROTEIN-RELATED
Paelopatides29648EXOSOME COMPLEX EXONUCLEASE RIBOSOMAL RNA PROCESSING PROTEIN
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