About Paelopatides sp. Yap

The hadal sea cucumber Paelopatides sp. Yap is a species of hadal sea cucumber in the family Stichopodidae, collected from the Yap Trench in the western Pacific Ocean. This species is adapted to the extreme conditions of the hadal zone, thriving at great depths where pressures are immense and temperatures are near freezing. Its discovery contributes to our understanding of biodiversity and ecological dynamics in one of the least explored regions of the deep sea.

Classification

Animalia Kingdom; Echinodermata (Phylum); Holothuroidea (Class); Stichopodidae (Family); Paelopatides (Genus); Paelopatides sp. Yap (Species)


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Paelopatides sp. YapEchinodermataPaelopatides sp. YapDeep sea6,633Yap Trench at 8°1′22"N; 137°50′41"E-

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completeness (%)Scaffold/Contig N50 (kb)GC content (%)Repeat Rate (%)Gene Number
-3.7GbContig2020-Fujian Agriculture and Forestry UniversityPRJCA00378989.40 137.138.1976.0657,522

References
TitleJournalPubmed ID
The genome of a hadal sea cucumber reveals novel adaptive strategies to deep-sea environmentsiScience36444293

Gene Information

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Gene IDDescription
Paelopatides30004SOLUTE CARRIER FAMILY 22 MEMBER
Paelopatides30005-
Paelopatides30006CXC DOMAIN-CONTAINING PROTEIN-RELATED
Paelopatides30007CXC DOMAIN-CONTAINING PROTEIN-RELATED
Paelopatides30008-
Paelopatides30009UNCHARACTERIZED
Paelopatides30010ODD-SKIPPED - RELATED
Paelopatides30011TRANSCRIPTION INITIATION FACTOR TFIID
Paelopatides30012ATP-DEPENDENT DNA HELICASE
Paelopatides30013-
Paelopatides30014-
Paelopatides30015-
Paelopatides30016ZGC:195170
Paelopatides30017SI:CH211-108C17.2-RELATED-RELATED
Paelopatides30018SI:CH211-108C17.2-RELATED-RELATED
Paelopatides30019ENDONUCLEASE-RELATED
Paelopatides30020POL PROTEIN
Paelopatides30021ZINC KNUCKLE DOMAINCONTAINING PROTEIN-RELATED
Paelopatides30022-
Paelopatides30023PROTEIN CBG26694
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