About Paelopatides sp. Yap

The hadal sea cucumber Paelopatides sp. Yap is a species of hadal sea cucumber in the family Stichopodidae, collected from the Yap Trench in the western Pacific Ocean. This species is adapted to the extreme conditions of the hadal zone, thriving at great depths where pressures are immense and temperatures are near freezing. Its discovery contributes to our understanding of biodiversity and ecological dynamics in one of the least explored regions of the deep sea.

Classification

Animalia Kingdom; Echinodermata (Phylum); Holothuroidea (Class); Stichopodidae (Family); Paelopatides (Genus); Paelopatides sp. Yap (Species)


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Paelopatides sp. YapEchinodermataPaelopatides sp. YapDeep sea6,633Yap Trench at 8°1′22"N; 137°50′41"E-

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completeness (%)Scaffold/Contig N50 (kb)GC content (%)Repeat Rate (%)Gene Number
-3.7GbContig2020-Fujian Agriculture and Forestry UniversityPRJCA00378989.40 137.138.1976.0657,522

References
TitleJournalPubmed ID
The genome of a hadal sea cucumber reveals novel adaptive strategies to deep-sea environmentsiScience36444293

Gene Information

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Gene IDDescription
Paelopatides30675PROTEIN QUA-1-RELATED
Paelopatides30676GTPASE, IMAP FAMILY MEMBER-RELATED
Paelopatides30677PHAGE_INTEGRASE DOMAIN-CONTAINING PROTEIN
Paelopatides30678PROTEIN KINASE DOMAIN-CONTAINING PROTEIN
Paelopatides30679-
Paelopatides30680REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN
Paelopatides30681PERSULFIDE DIOXYGENASE ETHE1
Paelopatides30682-
Paelopatides30683-
Paelopatides30684-
Paelopatides30685UNCHARACTERIZED
Paelopatides30686-
Paelopatides30687PROTEIN CBG26694
Paelopatides30688-
Paelopatides30689NETRIN RECEPTOR UNC5
Paelopatides30690PHAGE_INTEGRASE DOMAIN-CONTAINING PROTEIN
Paelopatides30691PIGGYBAC TRANSPOSABLE ELEMENT-DERIVED PROTEIN 4
Paelopatides30692SNARE PROTEINS
Paelopatides30693ANKYRIN REPEAT AND LEM DOMAIN-CONTAINING PROTEIN 2
Paelopatides30694-
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