About Paelopatides sp. Yap

The hadal sea cucumber Paelopatides sp. Yap is a species of hadal sea cucumber in the family Stichopodidae, collected from the Yap Trench in the western Pacific Ocean. This species is adapted to the extreme conditions of the hadal zone, thriving at great depths where pressures are immense and temperatures are near freezing. Its discovery contributes to our understanding of biodiversity and ecological dynamics in one of the least explored regions of the deep sea.

Classification

Animalia Kingdom; Echinodermata (Phylum); Holothuroidea (Class); Stichopodidae (Family); Paelopatides (Genus); Paelopatides sp. Yap (Species)


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Paelopatides sp. YapEchinodermataPaelopatides sp. YapDeep sea6,633Yap Trench at 8°1′22"N; 137°50′41"E-

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completeness (%)Scaffold/Contig N50 (kb)GC content (%)Repeat Rate (%)Gene Number
-3.7GbContig2020-Fujian Agriculture and Forestry UniversityPRJCA00378989.40 137.138.1976.0657,522

References
TitleJournalPubmed ID
The genome of a hadal sea cucumber reveals novel adaptive strategies to deep-sea environmentsiScience36444293

Gene Information

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Gene IDDescription
Paelopatides30695ZINC FINGER, ZZ DOMAIN CONTAINING 3
Paelopatides30696TRANSCRIPTASE, PUTATIVE-RELATED-RELATED
Paelopatides30697ENDO/EXONUCLEASE/PHOSPHATASE DOMAIN-CONTAINING PROTEIN
Paelopatides30698-
Paelopatides30699-
Paelopatides30700HISTONE H1
Paelopatides30701-
Paelopatides30702-
Paelopatides30703ZINC FINGER PROTEIN ZIC AND GLI
Paelopatides30704-
Paelopatides30705-
Paelopatides30706JANUS-A/JANUS-B
Paelopatides30707-
Paelopatides30708CXC DOMAIN-CONTAINING PROTEIN-RELATED
Paelopatides30709EXPRESSED PROTEIN
Paelopatides30710METABOTROPIC GLUTAMATE RECEPTOR
Paelopatides30711METABOTROPIC GLUTAMATE RECEPTOR
Paelopatides30712-
Paelopatides30713PHAGE_INTEGRASE DOMAIN-CONTAINING PROTEIN
Paelopatides30714CXC DOMAIN-CONTAINING PROTEIN-RELATED
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