About Paelopatides sp. Yap

The hadal sea cucumber Paelopatides sp. Yap is a species of hadal sea cucumber in the family Stichopodidae, collected from the Yap Trench in the western Pacific Ocean. This species is adapted to the extreme conditions of the hadal zone, thriving at great depths where pressures are immense and temperatures are near freezing. Its discovery contributes to our understanding of biodiversity and ecological dynamics in one of the least explored regions of the deep sea.

Classification

Animalia Kingdom; Echinodermata (Phylum); Holothuroidea (Class); Stichopodidae (Family); Paelopatides (Genus); Paelopatides sp. Yap (Species)


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Paelopatides sp. YapEchinodermataPaelopatides sp. YapDeep sea6,633Yap Trench at 8°1′22"N; 137°50′41"E-

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completeness (%)Scaffold/Contig N50 (kb)GC content (%)Repeat Rate (%)Gene Number
-3.7GbContig2020-Fujian Agriculture and Forestry UniversityPRJCA00378989.40 137.138.1976.0657,522

References
TitleJournalPubmed ID
The genome of a hadal sea cucumber reveals novel adaptive strategies to deep-sea environmentsiScience36444293

Gene Information

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Gene IDDescription
Paelopatides30866-
Paelopatides30867REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN
Paelopatides30868ALDEHYDE DEHYDROGENASE
Paelopatides30869ALDEHYDE DEHYDROGENASE
Paelopatides30870ALDEHYDE DEHYDROGENASE
Paelopatides30871PROTEIN CBG26694
Paelopatides30872ZGC:174356
Paelopatides30873REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN
Paelopatides30874-
Paelopatides30875BONUS, ISOFORM C-RELATED
Paelopatides30877-
Paelopatides30878NEUROPEPTIDE RECEPTOR-RELATED G-PROTEIN COUPLED RECEPTOR
Paelopatides30879SI:CH211-108C17.2-RELATED-RELATED
Paelopatides30880EPM2A-INTERACTING PROTEIN 1
Paelopatides30881OS01G0253100 PROTEIN
Paelopatides30882-
Paelopatides30883PROTEIN, PUTATIVE-RELATED
Paelopatides30885IP13529P
Paelopatides30886DUF3504 DOMAIN-CONTAINING PROTEIN
Paelopatides30887-
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