About Paelopatides sp. Yap

The hadal sea cucumber Paelopatides sp. Yap is a species of hadal sea cucumber in the family Stichopodidae, collected from the Yap Trench in the western Pacific Ocean. This species is adapted to the extreme conditions of the hadal zone, thriving at great depths where pressures are immense and temperatures are near freezing. Its discovery contributes to our understanding of biodiversity and ecological dynamics in one of the least explored regions of the deep sea.

Classification

Animalia Kingdom; Echinodermata (Phylum); Holothuroidea (Class); Stichopodidae (Family); Paelopatides (Genus); Paelopatides sp. Yap (Species)


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Paelopatides sp. YapEchinodermataPaelopatides sp. YapDeep sea6,633Yap Trench at 8°1′22"N; 137°50′41"E-

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completeness (%)Scaffold/Contig N50 (kb)GC content (%)Repeat Rate (%)Gene Number
-3.7GbContig2020-Fujian Agriculture and Forestry UniversityPRJCA00378989.40 137.138.1976.0657,522

References
TitleJournalPubmed ID
The genome of a hadal sea cucumber reveals novel adaptive strategies to deep-sea environmentsiScience36444293

Gene Information

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Gene IDDescription
Paelopatides30777PROTEASE M1 ZINC METALLOPROTEASE
Paelopatides30778HAT FAMILY DIMERISATION DOMAINCONTAINING PROTEIN-RELATED
Paelopatides30779PROTEIN CBG26694
Paelopatides30780PROTEIN CBG26694
Paelopatides30781-
Paelopatides30782OLIGORIBONUCLEASE, MITOCHONDRIAL
Paelopatides30783-
Paelopatides30784PROTEIN YIPPEE-LIKE CG15309-RELATED
Paelopatides30785ZINC TRANSPORTER 6
Paelopatides30786-
Paelopatides30787CXC DOMAIN-CONTAINING PROTEIN-RELATED
Paelopatides30788-
Paelopatides30789-
Paelopatides30790ACROSIN-RELATED
Paelopatides30791PARANEOPLASTIC ANTIGEN
Paelopatides30792PROTEIN CBG26694
Paelopatides30793-
Paelopatides30794-
Paelopatides30795PROTEIN CBG26694
Paelopatides30796METABOTROPIC GLUTAMATE RECEPTOR
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