About Paelopatides sp. Yap

The hadal sea cucumber Paelopatides sp. Yap is a species of hadal sea cucumber in the family Stichopodidae, collected from the Yap Trench in the western Pacific Ocean. This species is adapted to the extreme conditions of the hadal zone, thriving at great depths where pressures are immense and temperatures are near freezing. Its discovery contributes to our understanding of biodiversity and ecological dynamics in one of the least explored regions of the deep sea.

Classification

Animalia Kingdom; Echinodermata (Phylum); Holothuroidea (Class); Stichopodidae (Family); Paelopatides (Genus); Paelopatides sp. Yap (Species)


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Paelopatides sp. YapEchinodermataPaelopatides sp. YapDeep sea6,633Yap Trench at 8°1′22"N; 137°50′41"E-

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completeness (%)Scaffold/Contig N50 (kb)GC content (%)Repeat Rate (%)Gene Number
-3.7GbContig2020-Fujian Agriculture and Forestry UniversityPRJCA00378989.40 137.138.1976.0657,522

References
TitleJournalPubmed ID
The genome of a hadal sea cucumber reveals novel adaptive strategies to deep-sea environmentsiScience36444293

Gene Information

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Gene IDDescription
Paelopatides30797UNCHARACTERIZED
Paelopatides30798-
Paelopatides30799-
Paelopatides30800REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN
Paelopatides30801-
Paelopatides30802HETEROGENEOUS NUCLEAR RIBONUCLEOPROTEIN-RELATED
Paelopatides30803HETEROGENEOUS NUCLEAR RIBONUCLEOPROTEIN-RELATED
Paelopatides30804ENDO/EXONUCLEASE/PHOSPHATASE DOMAIN-CONTAINING PROTEIN
Paelopatides30805MAMMALIAN EPENDYMIN-RELATED PROTEIN 1
Paelopatides30806-
Paelopatides30809TUMOR SUSCEPTIBILITY GENE 101 PROTEIN-RELATED
Paelopatides30810TRANSIENT RECEPTOR POTENTIAL CHANNEL
Paelopatides30811-
Paelopatides30812-
Paelopatides30813TYROSINE-PROTEIN KINASE
Paelopatides30814RAS-ASSOCIATING DOMAIN-CONTAINING PROTEIN
Paelopatides30815RAS-ASSOCIATING DOMAIN-CONTAINING PROTEIN
Paelopatides30816RAS-ASSOCIATING DOMAIN-CONTAINING PROTEIN
Paelopatides30817-
Paelopatides30818ENDO/EXONUCLEASE/PHOSPHATASE DOMAIN-CONTAINING PROTEIN
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