About Paelopatides sp. Yap

The hadal sea cucumber Paelopatides sp. Yap is a species of hadal sea cucumber in the family Stichopodidae, collected from the Yap Trench in the western Pacific Ocean. This species is adapted to the extreme conditions of the hadal zone, thriving at great depths where pressures are immense and temperatures are near freezing. Its discovery contributes to our understanding of biodiversity and ecological dynamics in one of the least explored regions of the deep sea.

Classification

Animalia Kingdom; Echinodermata (Phylum); Holothuroidea (Class); Stichopodidae (Family); Paelopatides (Genus); Paelopatides sp. Yap (Species)


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Paelopatides sp. YapEchinodermataPaelopatides sp. YapDeep sea6,633Yap Trench at 8°1′22"N; 137°50′41"E-

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completeness (%)Scaffold/Contig N50 (kb)GC content (%)Repeat Rate (%)Gene Number
-3.7GbContig2020-Fujian Agriculture and Forestry UniversityPRJCA00378989.40 137.138.1976.0657,522

References
TitleJournalPubmed ID
The genome of a hadal sea cucumber reveals novel adaptive strategies to deep-sea environmentsiScience36444293

Gene Information

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Gene IDDescription
Paelopatides30888-
Paelopatides30889ACYL-MALONYL CONDENSING ENZYME-RELATED
Paelopatides30890DOUBLESEX AND MAB-3 RELATED TRANSCRIPTION FACTOR DMRT
Paelopatides30891-
Paelopatides30892-
Paelopatides30893-
Paelopatides30894-
Paelopatides30895-
Paelopatides30896-
Paelopatides30897-
Paelopatides30898GH08155P
Paelopatides30899SLIT RELATED LEUCINE-RICH REPEAT NEURONAL PROTEIN
Paelopatides30900IG(IMMUNOGLOBULIN) AND LRR(LEUCINE RICH REPEAT) DOMAINS
Paelopatides3090180 KDA MCM3-ASSOCIATED PROTEIN
Paelopatides30902-
Paelopatides30903TRANSPOSABLE ELEMENT-RELATED
Paelopatides30904-
Paelopatides30905-
Paelopatides30906ANK_REP_REGION DOMAIN-CONTAINING PROTEIN-RELATED
Paelopatides30907-
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