About Paelopatides sp. Yap

The hadal sea cucumber Paelopatides sp. Yap is a species of hadal sea cucumber in the family Stichopodidae, collected from the Yap Trench in the western Pacific Ocean. This species is adapted to the extreme conditions of the hadal zone, thriving at great depths where pressures are immense and temperatures are near freezing. Its discovery contributes to our understanding of biodiversity and ecological dynamics in one of the least explored regions of the deep sea.

Classification

Animalia Kingdom; Echinodermata (Phylum); Holothuroidea (Class); Stichopodidae (Family); Paelopatides (Genus); Paelopatides sp. Yap (Species)


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Paelopatides sp. YapEchinodermataPaelopatides sp. YapDeep sea6,633Yap Trench at 8°1′22"N; 137°50′41"E-

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completeness (%)Scaffold/Contig N50 (kb)GC content (%)Repeat Rate (%)Gene Number
-3.7GbContig2020-Fujian Agriculture and Forestry UniversityPRJCA00378989.40 137.138.1976.0657,522

References
TitleJournalPubmed ID
The genome of a hadal sea cucumber reveals novel adaptive strategies to deep-sea environmentsiScience36444293

Gene Information

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Gene IDDescription
Paelopatides31018-
Paelopatides31021REVERSE TRANSCRIPTASES
Paelopatides31022TYROSINE-PROTEIN KINASE RECEPTOR
Paelopatides31023-
Paelopatides31024-
Paelopatides31025-
Paelopatides31026F5/8 TYPE C DOMAIN-CONTAINING PROTEIN-RELATED
Paelopatides31027F5/8 TYPE C DOMAIN-CONTAINING PROTEIN-RELATED
Paelopatides31028-
Paelopatides31029PROTEIN CBG26694
Paelopatides31030FIBRINOGEN/TENASCIN/ANGIOPOEITIN
Paelopatides31033-
Paelopatides31034-
Paelopatides31035CXC DOMAIN-CONTAINING PROTEIN-RELATED
Paelopatides31036-
Paelopatides31037SRCR DOMAIN-CONTAINING PROTEIN
Paelopatides31038-
Paelopatides31039-
Paelopatides31040ENDO/EXONUCLEASE/PHOSPHATASE DOMAIN-CONTAINING PROTEIN
Paelopatides31043CARBOHYDRATE SULFOTRANSFERASE 15
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