About Paelopatides sp. Yap

The hadal sea cucumber Paelopatides sp. Yap is a species of hadal sea cucumber in the family Stichopodidae, collected from the Yap Trench in the western Pacific Ocean. This species is adapted to the extreme conditions of the hadal zone, thriving at great depths where pressures are immense and temperatures are near freezing. Its discovery contributes to our understanding of biodiversity and ecological dynamics in one of the least explored regions of the deep sea.

Classification

Animalia Kingdom; Echinodermata (Phylum); Holothuroidea (Class); Stichopodidae (Family); Paelopatides (Genus); Paelopatides sp. Yap (Species)


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Paelopatides sp. YapEchinodermataPaelopatides sp. YapDeep sea6,633Yap Trench at 8°1′22"N; 137°50′41"E-

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completeness (%)Scaffold/Contig N50 (kb)GC content (%)Repeat Rate (%)Gene Number
-3.7GbContig2020-Fujian Agriculture and Forestry UniversityPRJCA00378989.40 137.138.1976.0657,522

References
TitleJournalPubmed ID
The genome of a hadal sea cucumber reveals novel adaptive strategies to deep-sea environmentsiScience36444293

Gene Information

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Gene IDDescription
Paelopatides30996FAS-ASSOCIATING DEATH DOMAIN-CONTAINING PROTEIN FADD
Paelopatides30997REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN
Paelopatides30998-
Paelopatides30999REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN
Paelopatides31000REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN
Paelopatides31001REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN
Paelopatides31002BUCENTAUR RELATED
Paelopatides31003REVERSE TRANSCRIPTASES
Paelopatides31004POL PROTEIN
Paelopatides31005THAP DOMAIN-CONTAINING PROTEIN 6
Paelopatides31006B2 BRADYKININ RECEPTOR/ANGIOTENSIN II RECEPTOR
Paelopatides31007-
Paelopatides31008ULP_PROTEASE DOMAIN-CONTAINING PROTEIN
Paelopatides31009-
Paelopatides31010PROTEIN-GLUTAMINE GAMMA-GLUTAMYLTRANSFERASE
Paelopatides31011-
Paelopatides31014SERINE/THREONINE-PROTEIN KINASE SBK1
Paelopatides31015DESTABILASE-RELATED
Paelopatides31016-
Paelopatides31017LIPASE
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