About Paelopatides sp. Yap

The hadal sea cucumber Paelopatides sp. Yap is a species of hadal sea cucumber in the family Stichopodidae, collected from the Yap Trench in the western Pacific Ocean. This species is adapted to the extreme conditions of the hadal zone, thriving at great depths where pressures are immense and temperatures are near freezing. Its discovery contributes to our understanding of biodiversity and ecological dynamics in one of the least explored regions of the deep sea.

Classification

Animalia Kingdom; Echinodermata (Phylum); Holothuroidea (Class); Stichopodidae (Family); Paelopatides (Genus); Paelopatides sp. Yap (Species)


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Paelopatides sp. YapEchinodermataPaelopatides sp. YapDeep sea6,633Yap Trench at 8°1′22"N; 137°50′41"E-

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completeness (%)Scaffold/Contig N50 (kb)GC content (%)Repeat Rate (%)Gene Number
-3.7GbContig2020-Fujian Agriculture and Forestry UniversityPRJCA00378989.40 137.138.1976.0657,522

References
TitleJournalPubmed ID
The genome of a hadal sea cucumber reveals novel adaptive strategies to deep-sea environmentsiScience36444293

Gene Information

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Gene IDDescription
Paelopatides30955FIBRINOGEN/TENASCIN/ANGIOPOEITIN
Paelopatides30956FIBRINOGEN/TENASCIN/ANGIOPOEITIN
Paelopatides30957METHYLTHIORIBOSE-1-PHOSPHATE ISOMERASE
Paelopatides30958PROTEIN CBG26694
Paelopatides30959PROTEIN CBG26694
Paelopatides30960-
Paelopatides30961REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN
Paelopatides30962TRANSCRIPTASE, PUTATIVE-RELATED-RELATED
Paelopatides30963E3 UBIQUITIN-PROTEIN LIGASE RNF26
Paelopatides30964CXC DOMAIN-CONTAINING PROTEIN-RELATED
Paelopatides30965GENERAL TRANSCRIPTION FACTOR 2-RELATED ZINC FINGER PROTEIN
Paelopatides30966-
Paelopatides30967-
Paelopatides30968-
Paelopatides30969-
Paelopatides30970-
Paelopatides30971-
Paelopatides3097260 KDA RIBONUCLEOPROTEIN SSA/RO
Paelopatides30973-
Paelopatides30974-
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