About Paelopatides sp. Yap

The hadal sea cucumber Paelopatides sp. Yap is a species of hadal sea cucumber in the family Stichopodidae, collected from the Yap Trench in the western Pacific Ocean. This species is adapted to the extreme conditions of the hadal zone, thriving at great depths where pressures are immense and temperatures are near freezing. Its discovery contributes to our understanding of biodiversity and ecological dynamics in one of the least explored regions of the deep sea.

Classification

Animalia Kingdom; Echinodermata (Phylum); Holothuroidea (Class); Stichopodidae (Family); Paelopatides (Genus); Paelopatides sp. Yap (Species)


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Paelopatides sp. YapEchinodermataPaelopatides sp. YapDeep sea6,633Yap Trench at 8°1′22"N; 137°50′41"E-

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completeness (%)Scaffold/Contig N50 (kb)GC content (%)Repeat Rate (%)Gene Number
-3.7GbContig2020-Fujian Agriculture and Forestry UniversityPRJCA00378989.40 137.138.1976.0657,522

References
TitleJournalPubmed ID
The genome of a hadal sea cucumber reveals novel adaptive strategies to deep-sea environmentsiScience36444293

Gene Information

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Gene IDDescription
Paelopatides30975-
Paelopatides30977CILIA- AND FLAGELLA-ASSOCIATED PROTEIN 47
Paelopatides30978CILIA- AND FLAGELLA-ASSOCIATED PROTEIN 47
Paelopatides30979CILIA- AND FLAGELLA-ASSOCIATED PROTEIN 47
Paelopatides30980DNAJ HOMOLOG SUBFAMILY C MEMBER
Paelopatides30981DEHYDROGENASE/REDUCTASE (SDR FAMILY) MEMBER 4
Paelopatides30982ENDO/EXONUCLEASE/PHOSPHATASE DOMAIN-CONTAINING PROTEIN
Paelopatides30983DEHYDROGENASE/REDUCTASE (SDR FAMILY) MEMBER 4
Paelopatides30984UNCHARACTERIZED
Paelopatides30985ENDO/EXONUCLEASE/PHOSPHATASE DOMAIN-CONTAINING PROTEIN
Paelopatides30986BRIX DOMAIN CONTAINING PROTEIN
Paelopatides30987COMPLEMENT FACTOR H-RELATED
Paelopatides30988REVERSE TRANSCRIPTASES
Paelopatides30989-
Paelopatides30990BONUS, ISOFORM C-RELATED
Paelopatides30991FIBRINOGEN/TENASCIN/ANGIOPOEITIN
Paelopatides30992FIBRINOGEN/TENASCIN/ANGIOPOEITIN
Paelopatides30993-
Paelopatides30994-
Paelopatides30995REVERSE TRANSCRIPTASES
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