About Paelopatides sp. Yap

The hadal sea cucumber Paelopatides sp. Yap is a species of hadal sea cucumber in the family Stichopodidae, collected from the Yap Trench in the western Pacific Ocean. This species is adapted to the extreme conditions of the hadal zone, thriving at great depths where pressures are immense and temperatures are near freezing. Its discovery contributes to our understanding of biodiversity and ecological dynamics in one of the least explored regions of the deep sea.

Classification

Animalia Kingdom; Echinodermata (Phylum); Holothuroidea (Class); Stichopodidae (Family); Paelopatides (Genus); Paelopatides sp. Yap (Species)


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Paelopatides sp. YapEchinodermataPaelopatides sp. YapDeep sea6,633Yap Trench at 8°1′22"N; 137°50′41"E-

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completeness (%)Scaffold/Contig N50 (kb)GC content (%)Repeat Rate (%)Gene Number
-3.7GbContig2020-Fujian Agriculture and Forestry UniversityPRJCA00378989.40 137.138.1976.0657,522

References
TitleJournalPubmed ID
The genome of a hadal sea cucumber reveals novel adaptive strategies to deep-sea environmentsiScience36444293

Gene Information

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Gene IDDescription
Paelopatides31191-
Paelopatides31193PHD-TYPE DOMAIN-CONTAINING PROTEIN
Paelopatides31194RETROTRANSPOSON
Paelopatides31195SPINSTER
Paelopatides31196RIBONUCLEASE
Paelopatides31197POTASSIUM CHANNEL TETRAMERIZATION DOMAIN-CONTAINING
Paelopatides31198ENDO/EXONUCLEASE/PHOSPHATASE DOMAIN-CONTAINING PROTEIN
Paelopatides31199HAT FAMILY DIMERISATION DOMAINCONTAINING PROTEIN-RELATED
Paelopatides3120052 KDA REPRESSOR OF THE INHIBITOR OF THE PROTEIN KINASE-LIKE PROTEIN-RELATED
Paelopatides31201-
Paelopatides31202ADP-RIBOSYLGLYCOHYDROLASE
Paelopatides31203ADP-RIBOSYLGLYCOHYDROLASE
Paelopatides31204PROTEIN CBG26694
Paelopatides31205-
Paelopatides31206-
Paelopatides31207PHAGE_INTEGRASE DOMAIN-CONTAINING PROTEIN
Paelopatides31208MUCIN-17
Paelopatides31209CYCLIC NUCLEOTIDE-DEPENDENT PROTEIN KINASE
Paelopatides31210CXC DOMAIN-CONTAINING PROTEIN-RELATED
Paelopatides31211CXC DOMAIN-CONTAINING PROTEIN-RELATED
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