About Paelopatides sp. Yap

The hadal sea cucumber Paelopatides sp. Yap is a species of hadal sea cucumber in the family Stichopodidae, collected from the Yap Trench in the western Pacific Ocean. This species is adapted to the extreme conditions of the hadal zone, thriving at great depths where pressures are immense and temperatures are near freezing. Its discovery contributes to our understanding of biodiversity and ecological dynamics in one of the least explored regions of the deep sea.

Classification

Animalia Kingdom; Echinodermata (Phylum); Holothuroidea (Class); Stichopodidae (Family); Paelopatides (Genus); Paelopatides sp. Yap (Species)


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Paelopatides sp. YapEchinodermataPaelopatides sp. YapDeep sea6,633Yap Trench at 8°1′22"N; 137°50′41"E-

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completeness (%)Scaffold/Contig N50 (kb)GC content (%)Repeat Rate (%)Gene Number
-3.7GbContig2020-Fujian Agriculture and Forestry UniversityPRJCA00378989.40 137.138.1976.0657,522

References
TitleJournalPubmed ID
The genome of a hadal sea cucumber reveals novel adaptive strategies to deep-sea environmentsiScience36444293

Gene Information

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Gene IDDescription
Paelopatides31237REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN
Paelopatides31238ULP_PROTEASE DOMAIN-CONTAINING PROTEIN
Paelopatides31239-
Paelopatides31240-
Paelopatides31241-
Paelopatides31242-
Paelopatides31243ENZYMATIC POLYPROTEIN-RELATED
Paelopatides31244FI17866P1
Paelopatides31245TRANSCRIPTASE, PUTATIVE-RELATED-RELATED
Paelopatides31246EPM2A-INTERACTING PROTEIN 1
Paelopatides31247BUCENTAUR RELATED
Paelopatides31248PROTEIN CBG26694
Paelopatides31249REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN
Paelopatides31250REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN
Paelopatides31251REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN
Paelopatides31252-
Paelopatides31253-
Paelopatides31254-
Paelopatides31255-
Paelopatides31256SPIRE
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