About Paelopatides sp. Yap

The hadal sea cucumber Paelopatides sp. Yap is a species of hadal sea cucumber in the family Stichopodidae, collected from the Yap Trench in the western Pacific Ocean. This species is adapted to the extreme conditions of the hadal zone, thriving at great depths where pressures are immense and temperatures are near freezing. Its discovery contributes to our understanding of biodiversity and ecological dynamics in one of the least explored regions of the deep sea.

Classification

Animalia Kingdom; Echinodermata (Phylum); Holothuroidea (Class); Stichopodidae (Family); Paelopatides (Genus); Paelopatides sp. Yap (Species)


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Paelopatides sp. YapEchinodermataPaelopatides sp. YapDeep sea6,633Yap Trench at 8°1′22"N; 137°50′41"E-

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completeness (%)Scaffold/Contig N50 (kb)GC content (%)Repeat Rate (%)Gene Number
-3.7GbContig2020-Fujian Agriculture and Forestry UniversityPRJCA00378989.40 137.138.1976.0657,522

References
TitleJournalPubmed ID
The genome of a hadal sea cucumber reveals novel adaptive strategies to deep-sea environmentsiScience36444293

Gene Information

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Gene IDDescription
Paelopatides31954PROTEIN CBG12054-RELATED
Paelopatides31955PROTEIN CBG12054-RELATED
Paelopatides31956PROTEIN CBG12054-RELATED
Paelopatides31957-
Paelopatides31958-
Paelopatides31959EPM2A-INTERACTING PROTEIN 1
Paelopatides31960EPM2A-INTERACTING PROTEIN 1
Paelopatides31961-
Paelopatides31962TRANSMEMBRANE PROTEIN
Paelopatides31963ARF-GAP WITH DUAL PH DOMAIN-CONTAINING PROTEIN 1-LIKE PROTEIN
Paelopatides31964PROTEIN CBG26694
Paelopatides31965ARF-GAP WITH DUAL PH DOMAIN-CONTAINING PROTEIN 1-LIKE PROTEIN
Paelopatides31966-
Paelopatides31967PROTEIN KINASE DOMAIN-CONTAINING PROTEIN
Paelopatides31968PROTEIN KINASE DOMAIN-CONTAINING PROTEIN
Paelopatides31969PROTEIN CBG26694
Paelopatides31970PROTEIN CBG26694
Paelopatides31971ENDO/EXONUCLEASE/PHOSPHATASE DOMAIN-CONTAINING PROTEIN
Paelopatides31972ANTIGEN BSP, PUTATIVE-RELATED
Paelopatides31973HELICASE WITH DEATH DOMAIN-RELATED
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