About Paelopatides sp. Yap

The hadal sea cucumber Paelopatides sp. Yap is a species of hadal sea cucumber in the family Stichopodidae, collected from the Yap Trench in the western Pacific Ocean. This species is adapted to the extreme conditions of the hadal zone, thriving at great depths where pressures are immense and temperatures are near freezing. Its discovery contributes to our understanding of biodiversity and ecological dynamics in one of the least explored regions of the deep sea.

Classification

Animalia Kingdom; Echinodermata (Phylum); Holothuroidea (Class); Stichopodidae (Family); Paelopatides (Genus); Paelopatides sp. Yap (Species)


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Paelopatides sp. YapEchinodermataPaelopatides sp. YapDeep sea6,633Yap Trench at 8°1′22"N; 137°50′41"E-

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completeness (%)Scaffold/Contig N50 (kb)GC content (%)Repeat Rate (%)Gene Number
-3.7GbContig2020-Fujian Agriculture and Forestry UniversityPRJCA00378989.40 137.138.1976.0657,522

References
TitleJournalPubmed ID
The genome of a hadal sea cucumber reveals novel adaptive strategies to deep-sea environmentsiScience36444293

Gene Information

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Gene IDDescription
Paelopatides31994GAG-RELATED PROTEIN
Paelopatides31995REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN
Paelopatides31996-
Paelopatides31997ULP_PROTEASE DOMAIN-CONTAINING PROTEIN
Paelopatides31998BONUS, ISOFORM C-RELATED
Paelopatides31999BONUS, ISOFORM C-RELATED
Paelopatides32000-
Paelopatides32001RAS-ASSOCIATING DOMAIN-CONTAINING PROTEIN
Paelopatides32002ZINC KNUCKLE DOMAINCONTAINING PROTEIN-RELATED
Paelopatides32003CXC DOMAIN-CONTAINING PROTEIN-RELATED
Paelopatides32004-
Paelopatides32005-
Paelopatides32006PROTEIN CBG26694
Paelopatides32007BONUS, ISOFORM C-RELATED
Paelopatides32008-
Paelopatides32009ALDO/KETO REDUCTASE
Paelopatides32010TYROSINE-PROTEIN KINASE
Paelopatides32011-
Paelopatides32012NATRIURETIC PEPTIDE RECEPTOR 3-RELATED
Paelopatides32013GUANYLYL CYCLASE
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