About Paelopatides sp. Yap

The hadal sea cucumber Paelopatides sp. Yap is a species of hadal sea cucumber in the family Stichopodidae, collected from the Yap Trench in the western Pacific Ocean. This species is adapted to the extreme conditions of the hadal zone, thriving at great depths where pressures are immense and temperatures are near freezing. Its discovery contributes to our understanding of biodiversity and ecological dynamics in one of the least explored regions of the deep sea.

Classification

Animalia Kingdom; Echinodermata (Phylum); Holothuroidea (Class); Stichopodidae (Family); Paelopatides (Genus); Paelopatides sp. Yap (Species)


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Paelopatides sp. YapEchinodermataPaelopatides sp. YapDeep sea6,633Yap Trench at 8°1′22"N; 137°50′41"E-

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completeness (%)Scaffold/Contig N50 (kb)GC content (%)Repeat Rate (%)Gene Number
-3.7GbContig2020-Fujian Agriculture and Forestry UniversityPRJCA00378989.40 137.138.1976.0657,522

References
TitleJournalPubmed ID
The genome of a hadal sea cucumber reveals novel adaptive strategies to deep-sea environmentsiScience36444293

Gene Information

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Gene IDDescription
Paelopatides32061REVERSE TRANSCRIPTASES
Paelopatides32062TYROSINE-PROTEIN KINASE
Paelopatides32063-
Paelopatides32064REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN
Paelopatides32065TYROSINE-PROTEIN KINASE
Paelopatides32066-
Paelopatides32067-
Paelopatides32068NUCLEOPORIN NUP37 P37 -RELATED
Paelopatides32069NUCLEOPORIN NUP37 P37 -RELATED
Paelopatides32070RIBOSOMAL PROTEIN L23-RELATED
Paelopatides32071UNCHARACTERIZED
Paelopatides32072ENDO/EXONUCLEASE/PHOSPHATASE DOMAIN-CONTAINING PROTEIN
Paelopatides32073UNCHARACTERIZED
Paelopatides32074-
Paelopatides32075-
Paelopatides32076STEROL CARRIER PROTEIN 2 SCP-2 FAMILY PROTEIN
Paelopatides32077MANNOSE, PHOSPHOLIPASE, LECTIN RECEPTOR RELATED
Paelopatides32078-
Paelopatides32079-
Paelopatides32080PHAGE_INTEGRASE DOMAIN-CONTAINING PROTEIN
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