About Paelopatides sp. Yap

The hadal sea cucumber Paelopatides sp. Yap is a species of hadal sea cucumber in the family Stichopodidae, collected from the Yap Trench in the western Pacific Ocean. This species is adapted to the extreme conditions of the hadal zone, thriving at great depths where pressures are immense and temperatures are near freezing. Its discovery contributes to our understanding of biodiversity and ecological dynamics in one of the least explored regions of the deep sea.

Classification

Animalia Kingdom; Echinodermata (Phylum); Holothuroidea (Class); Stichopodidae (Family); Paelopatides (Genus); Paelopatides sp. Yap (Species)


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Paelopatides sp. YapEchinodermataPaelopatides sp. YapDeep sea6,633Yap Trench at 8°1′22"N; 137°50′41"E-

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completeness (%)Scaffold/Contig N50 (kb)GC content (%)Repeat Rate (%)Gene Number
-3.7GbContig2020-Fujian Agriculture and Forestry UniversityPRJCA00378989.40 137.138.1976.0657,522

References
TitleJournalPubmed ID
The genome of a hadal sea cucumber reveals novel adaptive strategies to deep-sea environmentsiScience36444293

Gene Information

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Gene IDDescription
Paelopatides32081-
Paelopatides32082ZINC FINGER, CCHC DOMAIN CONTAINING 8
Paelopatides32083-
Paelopatides32084ARGININOSUCCINATE LYASE
Paelopatides32085DIMETHYLANILINE MONOOXYGENASE
Paelopatides32086DIMETHYLANILINE MONOOXYGENASE
Paelopatides32087-
Paelopatides32088-
Paelopatides32089F5/8 TYPE C DOMAIN-CONTAINING PROTEIN
Paelopatides32090-
Paelopatides32091HAT FAMILY DIMERISATION DOMAINCONTAINING PROTEIN-RELATED
Paelopatides32092-
Paelopatides32093PERFORIN-LIKE PROTEIN 1
Paelopatides32094ATP-CITRATE SYNTHASE
Paelopatides32095GLUTAMATE CYSTEINE LIGASE REGULATORY SUBUNIT
Paelopatides32096-
Paelopatides32097DIMETHYLANILINE MONOOXYGENASE
Paelopatides32098DIMETHYLANILINE MONOOXYGENASE
Paelopatides32099FIBRINOGEN/TENASCIN/ANGIOPOEITIN
Paelopatides32100ZINC KNUCKLE DOMAINCONTAINING PROTEIN-RELATED
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