About Paelopatides sp. Yap

The hadal sea cucumber Paelopatides sp. Yap is a species of hadal sea cucumber in the family Stichopodidae, collected from the Yap Trench in the western Pacific Ocean. This species is adapted to the extreme conditions of the hadal zone, thriving at great depths where pressures are immense and temperatures are near freezing. Its discovery contributes to our understanding of biodiversity and ecological dynamics in one of the least explored regions of the deep sea.

Classification

Animalia Kingdom; Echinodermata (Phylum); Holothuroidea (Class); Stichopodidae (Family); Paelopatides (Genus); Paelopatides sp. Yap (Species)


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Paelopatides sp. YapEchinodermataPaelopatides sp. YapDeep sea6,633Yap Trench at 8°1′22"N; 137°50′41"E-

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completeness (%)Scaffold/Contig N50 (kb)GC content (%)Repeat Rate (%)Gene Number
-3.7GbContig2020-Fujian Agriculture and Forestry UniversityPRJCA00378989.40 137.138.1976.0657,522

References
TitleJournalPubmed ID
The genome of a hadal sea cucumber reveals novel adaptive strategies to deep-sea environmentsiScience36444293

Gene Information

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Gene IDDescription
Paelopatides32142FIBRINOGEN/TENASCIN/ANGIOPOEITIN
Paelopatides32143-
Paelopatides32144ZINC KNUCKLE DOMAINCONTAINING PROTEIN-RELATED
Paelopatides32145-
Paelopatides32146PHOSPHATIDYLINOSITOL KINASE
Paelopatides32147RIBOSOMAL PROTEIN S9
Paelopatides32148-
Paelopatides32149REVERSE TRANSCRIPTASES
Paelopatides32150SET DOMAIN-CONTAINING PROTEIN-RELATED
Paelopatides32151SET DOMAIN-CONTAINING PROTEIN-RELATED
Paelopatides32152-
Paelopatides32153-
Paelopatides32154-
Paelopatides32155-
Paelopatides32156HISTONE DEACETYLASE HDAC1-RELATED
Paelopatides32157-
Paelopatides32158-
Paelopatides32159-
Paelopatides32160FIBRINOGEN/TENASCIN/ANGIOPOEITIN
Paelopatides32161SEPIAPTERIN REDUCTASE
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