About Paelopatides sp. Yap

The hadal sea cucumber Paelopatides sp. Yap is a species of hadal sea cucumber in the family Stichopodidae, collected from the Yap Trench in the western Pacific Ocean. This species is adapted to the extreme conditions of the hadal zone, thriving at great depths where pressures are immense and temperatures are near freezing. Its discovery contributes to our understanding of biodiversity and ecological dynamics in one of the least explored regions of the deep sea.

Classification

Animalia Kingdom; Echinodermata (Phylum); Holothuroidea (Class); Stichopodidae (Family); Paelopatides (Genus); Paelopatides sp. Yap (Species)


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Paelopatides sp. YapEchinodermataPaelopatides sp. YapDeep sea6,633Yap Trench at 8°1′22"N; 137°50′41"E-

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completeness (%)Scaffold/Contig N50 (kb)GC content (%)Repeat Rate (%)Gene Number
-3.7GbContig2020-Fujian Agriculture and Forestry UniversityPRJCA00378989.40 137.138.1976.0657,522

References
TitleJournalPubmed ID
The genome of a hadal sea cucumber reveals novel adaptive strategies to deep-sea environmentsiScience36444293

Gene Information

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Gene IDDescription
Paelopatides32162-
Paelopatides32163CRUMBS FAMILY MEMBER
Paelopatides32164PROTEIN CBG26694
Paelopatides32165PROTEIN CBG26694
Paelopatides32166ZINC FINGER PROTEIN 200
Paelopatides32167-
Paelopatides32168PROTEIN CBG26694
Paelopatides32169-
Paelopatides32170KRAB AND ZINC FINGER DOMAIN-CONTAINING
Paelopatides32171CYTOCHROME P450 FAMILY 3
Paelopatides32172-
Paelopatides321735'-NUCLEOTIDASE-RELATED
Paelopatides32174OS05G0310600 PROTEIN
Paelopatides32175BEN DOMAIN-CONTAINING PROTEIN 5
Paelopatides32176ADHESION G PROTEIN-COUPLED RECEPTOR G7
Paelopatides32177-
Paelopatides32178ADHESION G PROTEIN-COUPLED RECEPTOR G7
Paelopatides32179NUCLEAR MITOTIC APPARATUS PROTEIN 1-RELATED
Paelopatides32180-
Paelopatides32181PROTEIN CBG26694
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