About Paelopatides sp. Yap

The hadal sea cucumber Paelopatides sp. Yap is a species of hadal sea cucumber in the family Stichopodidae, collected from the Yap Trench in the western Pacific Ocean. This species is adapted to the extreme conditions of the hadal zone, thriving at great depths where pressures are immense and temperatures are near freezing. Its discovery contributes to our understanding of biodiversity and ecological dynamics in one of the least explored regions of the deep sea.

Classification

Animalia Kingdom; Echinodermata (Phylum); Holothuroidea (Class); Stichopodidae (Family); Paelopatides (Genus); Paelopatides sp. Yap (Species)


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Paelopatides sp. YapEchinodermataPaelopatides sp. YapDeep sea6,633Yap Trench at 8°1′22"N; 137°50′41"E-

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completeness (%)Scaffold/Contig N50 (kb)GC content (%)Repeat Rate (%)Gene Number
-3.7GbContig2020-Fujian Agriculture and Forestry UniversityPRJCA00378989.40 137.138.1976.0657,522

References
TitleJournalPubmed ID
The genome of a hadal sea cucumber reveals novel adaptive strategies to deep-sea environmentsiScience36444293

Gene Information

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Gene IDDescription
Paelopatides32223-
Paelopatides32224-
Paelopatides32225GLYCOPROTEIN HORMONE RECEPTOR
Paelopatides32226-
Paelopatides32227REGULATOR OF G PROTEIN SIGNALING
Paelopatides32228-
Paelopatides32229PHAGE_INTEGRASE DOMAIN-CONTAINING PROTEIN
Paelopatides32230UNCHARACTERIZED
Paelopatides32231ADHESION G-PROTEIN COUPLED RECEPTOR V1
Paelopatides32232-
Paelopatides32233NETRIN RECEPTOR UNC5
Paelopatides32234TRNA-AMINOACYLATION COFACTOR ARC1 FAMILY MEMBER
Paelopatides32235DPH3 HOMOLOG-RELATED
Paelopatides32236ZINC FINGER MATRIN-TYPE PROTEIN 2
Paelopatides32238-
Paelopatides32239-
Paelopatides32240-
Paelopatides32241GTP-BINDING PROTEIN-RELATED
Paelopatides32242GTP-BINDING PROTEIN-RELATED
Paelopatides32243-
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