About Paelopatides sp. Yap

The hadal sea cucumber Paelopatides sp. Yap is a species of hadal sea cucumber in the family Stichopodidae, collected from the Yap Trench in the western Pacific Ocean. This species is adapted to the extreme conditions of the hadal zone, thriving at great depths where pressures are immense and temperatures are near freezing. Its discovery contributes to our understanding of biodiversity and ecological dynamics in one of the least explored regions of the deep sea.

Classification

Animalia Kingdom; Echinodermata (Phylum); Holothuroidea (Class); Stichopodidae (Family); Paelopatides (Genus); Paelopatides sp. Yap (Species)


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Paelopatides sp. YapEchinodermataPaelopatides sp. YapDeep sea6,633Yap Trench at 8°1′22"N; 137°50′41"E-

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completeness (%)Scaffold/Contig N50 (kb)GC content (%)Repeat Rate (%)Gene Number
-3.7GbContig2020-Fujian Agriculture and Forestry UniversityPRJCA00378989.40 137.138.1976.0657,522

References
TitleJournalPubmed ID
The genome of a hadal sea cucumber reveals novel adaptive strategies to deep-sea environmentsiScience36444293

Gene Information

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Gene IDDescription
Paelopatides32264RAS-ASSOCIATING DOMAIN-CONTAINING PROTEIN
Paelopatides32265ZINC FINGER PROTEIN
Paelopatides32266RETROTRANSPOSON
Paelopatides32267REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN
Paelopatides32268OS05G0310600 PROTEIN
Paelopatides32269-
Paelopatides32270REVERSE TRANSCRIPTASES
Paelopatides32271TRANSPOSASE, PUTATIVE-RELATED
Paelopatides32272REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN
Paelopatides32273TAX1 BINDING PROTEIN-RELATED
Paelopatides32274TAX1 BINDING PROTEIN-RELATED
Paelopatides32275-
Paelopatides32276-
Paelopatides32277-
Paelopatides32278-
Paelopatides32279-
Paelopatides32281-
Paelopatides32282-
Paelopatides32283PEPTIDE METHIONINE SULFOXIDE REDUCTASE
Paelopatides32284-
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