About Paelopatides sp. Yap

The hadal sea cucumber Paelopatides sp. Yap is a species of hadal sea cucumber in the family Stichopodidae, collected from the Yap Trench in the western Pacific Ocean. This species is adapted to the extreme conditions of the hadal zone, thriving at great depths where pressures are immense and temperatures are near freezing. Its discovery contributes to our understanding of biodiversity and ecological dynamics in one of the least explored regions of the deep sea.

Classification

Animalia Kingdom; Echinodermata (Phylum); Holothuroidea (Class); Stichopodidae (Family); Paelopatides (Genus); Paelopatides sp. Yap (Species)


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Paelopatides sp. YapEchinodermataPaelopatides sp. YapDeep sea6,633Yap Trench at 8°1′22"N; 137°50′41"E-

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completeness (%)Scaffold/Contig N50 (kb)GC content (%)Repeat Rate (%)Gene Number
-3.7GbContig2020-Fujian Agriculture and Forestry UniversityPRJCA00378989.40 137.138.1976.0657,522

References
TitleJournalPubmed ID
The genome of a hadal sea cucumber reveals novel adaptive strategies to deep-sea environmentsiScience36444293

Gene Information

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Gene IDDescription
Paelopatides32326-
Paelopatides32327-
Paelopatides32328UBIQUITIN
Paelopatides32329UBIQUITIN
Paelopatides32330POL PROTEIN
Paelopatides32331-
Paelopatides32332-
Paelopatides32333-
Paelopatides32334-
Paelopatides32335-
Paelopatides32336-
Paelopatides32337FIBRINOGEN/TENASCIN/ANGIOPOEITIN
Paelopatides32338REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN
Paelopatides32339POL PROTEIN
Paelopatides32340CHLORIDE CHANNEL PROTEIN CLC FAMILY MEMBER
Paelopatides32341CHLORIDE CHANNEL PROTEIN CLC FAMILY MEMBER
Paelopatides32342-
Paelopatides32343-
Paelopatides32344MATRIX PROTEIN, PUTATIVE-RELATED
Paelopatides32345PHAGE_INTEGRASE DOMAIN-CONTAINING PROTEIN
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