About Paelopatides sp. Yap

The hadal sea cucumber Paelopatides sp. Yap is a species of hadal sea cucumber in the family Stichopodidae, collected from the Yap Trench in the western Pacific Ocean. This species is adapted to the extreme conditions of the hadal zone, thriving at great depths where pressures are immense and temperatures are near freezing. Its discovery contributes to our understanding of biodiversity and ecological dynamics in one of the least explored regions of the deep sea.

Classification

Animalia Kingdom; Echinodermata (Phylum); Holothuroidea (Class); Stichopodidae (Family); Paelopatides (Genus); Paelopatides sp. Yap (Species)


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Paelopatides sp. YapEchinodermataPaelopatides sp. YapDeep sea6,633Yap Trench at 8°1′22"N; 137°50′41"E-

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completeness (%)Scaffold/Contig N50 (kb)GC content (%)Repeat Rate (%)Gene Number
-3.7GbContig2020-Fujian Agriculture and Forestry UniversityPRJCA00378989.40 137.138.1976.0657,522

References
TitleJournalPubmed ID
The genome of a hadal sea cucumber reveals novel adaptive strategies to deep-sea environmentsiScience36444293

Gene Information

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Gene IDDescription
Paelopatides32406SUCCINYL-COA SYNTHETASE BETA CHAIN
Paelopatides32407SUCCINYL-COA SYNTHETASE BETA CHAIN
Paelopatides32408SUCCINYL-COA SYNTHETASE BETA CHAIN
Paelopatides32409SARCOMA ANTIGEN NY-SAR-24/CYTOSKELETAL PROTEIN SOJO
Paelopatides32410SERINE-THREONINE PROTEIN KINASE
Paelopatides32411-
Paelopatides32412F5/8 TYPE C DOMAIN-CONTAINING PROTEIN-RELATED
Paelopatides32413PROTEIN EVA-1
Paelopatides32414-
Paelopatides32415PHD-TYPE DOMAIN-CONTAINING PROTEIN
Paelopatides32416RETROTRANSPOSON
Paelopatides32417PHD-TYPE DOMAIN-CONTAINING PROTEIN
Paelopatides32418PHD-TYPE DOMAIN-CONTAINING PROTEIN
Paelopatides32419RETROTRANSPOSON
Paelopatides32420UNCHARACTERIZED
Paelopatides32421ULP_PROTEASE DOMAIN-CONTAINING PROTEIN
Paelopatides32422-
Paelopatides32423-
Paelopatides32424-
Paelopatides32425ZINC FINGER PROTEIN
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