About Paelopatides sp. Yap

The hadal sea cucumber Paelopatides sp. Yap is a species of hadal sea cucumber in the family Stichopodidae, collected from the Yap Trench in the western Pacific Ocean. This species is adapted to the extreme conditions of the hadal zone, thriving at great depths where pressures are immense and temperatures are near freezing. Its discovery contributes to our understanding of biodiversity and ecological dynamics in one of the least explored regions of the deep sea.

Classification

Animalia Kingdom; Echinodermata (Phylum); Holothuroidea (Class); Stichopodidae (Family); Paelopatides (Genus); Paelopatides sp. Yap (Species)


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Paelopatides sp. YapEchinodermataPaelopatides sp. YapDeep sea6,633Yap Trench at 8°1′22"N; 137°50′41"E-

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completeness (%)Scaffold/Contig N50 (kb)GC content (%)Repeat Rate (%)Gene Number
-3.7GbContig2020-Fujian Agriculture and Forestry UniversityPRJCA00378989.40 137.138.1976.0657,522

References
TitleJournalPubmed ID
The genome of a hadal sea cucumber reveals novel adaptive strategies to deep-sea environmentsiScience36444293

Gene Information

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Gene IDDescription
Paelopatides32467TAX1-BINDING PROTEIN 3-RELATED
Paelopatides32468PA-PL1 PHOSPHOLIPASE FAMILY
Paelopatides32469-
Paelopatides32471PRE-MRNA SPLICING FACTOR PRP8
Paelopatides32472-
Paelopatides32473-
Paelopatides32474UNCHARACTERIZED
Paelopatides32475-
Paelopatides32476REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN
Paelopatides32477EPM2A-INTERACTING PROTEIN 1
Paelopatides32478FORMIN
Paelopatides32479SIMILAR TO KIAA0825 PROTEIN
Paelopatides32480REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN
Paelopatides32481SIMILAR TO KIAA0825 PROTEIN
Paelopatides32482SIMILAR TO KIAA0825 PROTEIN
Paelopatides32483HYPOXIA-INDUCIBLE FACTOR 1 ALPHA INHIBITOR-RELATED
Paelopatides32484SORTING NEXIN-22 AND 24
Paelopatides32485DNA MISMATCH REPAIR PROTEIN MUTS FAMILY MEMBER
Paelopatides32486PROTEIN CBG26694
Paelopatides32487-
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