About Paelopatides sp. Yap

The hadal sea cucumber Paelopatides sp. Yap is a species of hadal sea cucumber in the family Stichopodidae, collected from the Yap Trench in the western Pacific Ocean. This species is adapted to the extreme conditions of the hadal zone, thriving at great depths where pressures are immense and temperatures are near freezing. Its discovery contributes to our understanding of biodiversity and ecological dynamics in one of the least explored regions of the deep sea.

Classification

Animalia Kingdom; Echinodermata (Phylum); Holothuroidea (Class); Stichopodidae (Family); Paelopatides (Genus); Paelopatides sp. Yap (Species)


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Paelopatides sp. YapEchinodermataPaelopatides sp. YapDeep sea6,633Yap Trench at 8°1′22"N; 137°50′41"E-

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completeness (%)Scaffold/Contig N50 (kb)GC content (%)Repeat Rate (%)Gene Number
-3.7GbContig2020-Fujian Agriculture and Forestry UniversityPRJCA00378989.40 137.138.1976.0657,522

References
TitleJournalPubmed ID
The genome of a hadal sea cucumber reveals novel adaptive strategies to deep-sea environmentsiScience36444293

Gene Information

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Gene IDDescription
Paelopatides32447TRANSCRIPTION FACTOR E2F
Paelopatides32448-
Paelopatides32449PEPTIDASE
Paelopatides32450-
Paelopatides32451TRANSLIN-ASSOCIATED FACTOR X-INTERACTING PROTEIN 1
Paelopatides32452-
Paelopatides32453RAN BINDING PROTEIN 9-RELATED
Paelopatides32454UBIQUITIN-CONJUGATING ENZYME E2
Paelopatides32455UNCHARACTERIZED
Paelopatides32456EXOSTOSIN HEPARAN SULFATE GLYCOSYLTRANSFERASE -RELATED
Paelopatides32457DOLICHYL-DIPHOSPHOOLIGOSACCHARIDE--PROTEIN GLYCOSYLTRANSFERASE SUBUNIT DAD1
Paelopatides32458-
Paelopatides32459MISEXPRESSION SUPPRESSOR OF RAS 6
Paelopatides32460MISEXPRESSION SUPPRESSOR OF RAS 6
Paelopatides32461NUCLEOLAR PROTEIN 9
Paelopatides32462SERINE/THREONINE-PROTEIN KINASE UNC-51-RELATED
Paelopatides32463UNCHARACTERIZED
Paelopatides32464ADP-RIBOSYLATION FACTOR-RELATED PROTEIN 1
Paelopatides32465POPEYE DOMAIN CONTAINING PROTEIN
Paelopatides32466ZGC:195170
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