About Paelopatides sp. Yap

The hadal sea cucumber Paelopatides sp. Yap is a species of hadal sea cucumber in the family Stichopodidae, collected from the Yap Trench in the western Pacific Ocean. This species is adapted to the extreme conditions of the hadal zone, thriving at great depths where pressures are immense and temperatures are near freezing. Its discovery contributes to our understanding of biodiversity and ecological dynamics in one of the least explored regions of the deep sea.

Classification

Animalia Kingdom; Echinodermata (Phylum); Holothuroidea (Class); Stichopodidae (Family); Paelopatides (Genus); Paelopatides sp. Yap (Species)


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Paelopatides sp. YapEchinodermataPaelopatides sp. YapDeep sea6,633Yap Trench at 8°1′22"N; 137°50′41"E-

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completeness (%)Scaffold/Contig N50 (kb)GC content (%)Repeat Rate (%)Gene Number
-3.7GbContig2020-Fujian Agriculture and Forestry UniversityPRJCA00378989.40 137.138.1976.0657,522

References
TitleJournalPubmed ID
The genome of a hadal sea cucumber reveals novel adaptive strategies to deep-sea environmentsiScience36444293

Gene Information

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Gene IDDescription
Paelopatides33592WD40 REPEAT PROTEIN 12, 37
Paelopatides33593EUKARYOTE SPECIFIC DSRNA BINDING PROTEIN
Paelopatides33594EUKARYOTE SPECIFIC DSRNA BINDING PROTEIN
Paelopatides33595UPF0764 PROTEIN C16ORF89
Paelopatides33596FORMIN-LIKE PROTEIN
Paelopatides33597-
Paelopatides33598INTERFERON-INDUCED PROTEIN WITH TETRATRICOPEPTIDE REPEATS
Paelopatides33599REVERSE TRANSCRIPTASES
Paelopatides33600TGF-BETA FAMILY
Paelopatides33601BUCENTAUR RELATED
Paelopatides33602UNCHARACTERIZED
Paelopatides33603-
Paelopatides33604TRANSCRIPTASE, PUTATIVE-RELATED-RELATED
Paelopatides33605FIBRINOGEN/TENASCIN/ANGIOPOEITIN
Paelopatides33606TRANSCRIPTASE, PUTATIVE-RELATED-RELATED
Paelopatides33607SI:CH211-108C17.2-RELATED-RELATED
Paelopatides33608FIBRINOGEN/TENASCIN/ANGIOPOEITIN
Paelopatides33609FIBRINOGEN/TENASCIN/ANGIOPOEITIN
Paelopatides33610ACROSIN-RELATED
Paelopatides33611-
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