About Paelopatides sp. Yap

The hadal sea cucumber Paelopatides sp. Yap is a species of hadal sea cucumber in the family Stichopodidae, collected from the Yap Trench in the western Pacific Ocean. This species is adapted to the extreme conditions of the hadal zone, thriving at great depths where pressures are immense and temperatures are near freezing. Its discovery contributes to our understanding of biodiversity and ecological dynamics in one of the least explored regions of the deep sea.

Classification

Animalia Kingdom; Echinodermata (Phylum); Holothuroidea (Class); Stichopodidae (Family); Paelopatides (Genus); Paelopatides sp. Yap (Species)


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Paelopatides sp. YapEchinodermataPaelopatides sp. YapDeep sea6,633Yap Trench at 8°1′22"N; 137°50′41"E-

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completeness (%)Scaffold/Contig N50 (kb)GC content (%)Repeat Rate (%)Gene Number
-3.7GbContig2020-Fujian Agriculture and Forestry UniversityPRJCA00378989.40 137.138.1976.0657,522

References
TitleJournalPubmed ID
The genome of a hadal sea cucumber reveals novel adaptive strategies to deep-sea environmentsiScience36444293

Gene Information

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Gene IDDescription
Paelopatides33652IP13529P
Paelopatides33653-
Paelopatides33654EPM2A-INTERACTING PROTEIN 1
Paelopatides33655EPM2A-INTERACTING PROTEIN 1
Paelopatides33656REVERSE TRANSCRIPTASES
Paelopatides33657BUCENTAUR RELATED
Paelopatides33658EGL NINE HOMOLOG-RELATED
Paelopatides33659ORGANIC SOLUTE TRANSPORTER-RELATED
Paelopatides33660ORGANIC SOLUTE TRANSPORTER-RELATED
Paelopatides33661CYSTEINE-RICH SECRETORY PROTEIN-RELATED
Paelopatides33662REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN
Paelopatides33663EPM2A-INTERACTING PROTEIN 1
Paelopatides33664EPM2A-INTERACTING PROTEIN 1
Paelopatides33667BUCENTAUR RELATED
Paelopatides33668REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN
Paelopatides33669-
Paelopatides33670-
Paelopatides33671EXPRESSED PROTEIN
Paelopatides33672ATP-BINDING CASSETTE SUB-FAMILY C
Paelopatides33673AP COMPLEX SUBUNIT MU
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