About Paelopatides sp. Yap

The hadal sea cucumber Paelopatides sp. Yap is a species of hadal sea cucumber in the family Stichopodidae, collected from the Yap Trench in the western Pacific Ocean. This species is adapted to the extreme conditions of the hadal zone, thriving at great depths where pressures are immense and temperatures are near freezing. Its discovery contributes to our understanding of biodiversity and ecological dynamics in one of the least explored regions of the deep sea.

Classification

Animalia Kingdom; Echinodermata (Phylum); Holothuroidea (Class); Stichopodidae (Family); Paelopatides (Genus); Paelopatides sp. Yap (Species)


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Paelopatides sp. YapEchinodermataPaelopatides sp. YapDeep sea6,633Yap Trench at 8°1′22"N; 137°50′41"E-

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completeness (%)Scaffold/Contig N50 (kb)GC content (%)Repeat Rate (%)Gene Number
-3.7GbContig2020-Fujian Agriculture and Forestry UniversityPRJCA00378989.40 137.138.1976.0657,522

References
TitleJournalPubmed ID
The genome of a hadal sea cucumber reveals novel adaptive strategies to deep-sea environmentsiScience36444293

Gene Information

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Gene IDDescription
Paelopatides33612B2 BRADYKININ RECEPTOR/ANGIOTENSIN II RECEPTOR
Paelopatides33613-
Paelopatides33614ZINC FINGER AND BTB DOMAIN-CONTAINING
Paelopatides33615TRANSDUCIN BETA-LIKE 3
Paelopatides33616MITOCHONDRIAL DICARBOXYLATE CARRIER-RELATED
Paelopatides33617IP13529P
Paelopatides33618-
Paelopatides33619BCL2-ASSOCIATED ATHANOGENE
Paelopatides33620-
Paelopatides33621-
Paelopatides33622ALPHA-2,8-SIALYLTRANSFERASE
Paelopatides33623-
Paelopatides33624-
Paelopatides33625SRCR DOMAIN-CONTAINING PROTEIN
Paelopatides33626SUCCINATE DEHYDROGENASE ASSEMBLY FACTOR 4, MITOCHONDRIAL
Paelopatides33627UNCHARACTERIZED
Paelopatides33628UNCHARACTERIZED
Paelopatides33629REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN
Paelopatides33630FIBRINOGEN/TENASCIN/ANGIOPOEITIN
Paelopatides33631-
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