About Paelopatides sp. Yap

The hadal sea cucumber Paelopatides sp. Yap is a species of hadal sea cucumber in the family Stichopodidae, collected from the Yap Trench in the western Pacific Ocean. This species is adapted to the extreme conditions of the hadal zone, thriving at great depths where pressures are immense and temperatures are near freezing. Its discovery contributes to our understanding of biodiversity and ecological dynamics in one of the least explored regions of the deep sea.

Classification

Animalia Kingdom; Echinodermata (Phylum); Holothuroidea (Class); Stichopodidae (Family); Paelopatides (Genus); Paelopatides sp. Yap (Species)


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Paelopatides sp. YapEchinodermataPaelopatides sp. YapDeep sea6,633Yap Trench at 8°1′22"N; 137°50′41"E-

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completeness (%)Scaffold/Contig N50 (kb)GC content (%)Repeat Rate (%)Gene Number
-3.7GbContig2020-Fujian Agriculture and Forestry UniversityPRJCA00378989.40 137.138.1976.0657,522

References
TitleJournalPubmed ID
The genome of a hadal sea cucumber reveals novel adaptive strategies to deep-sea environmentsiScience36444293

Gene Information

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Gene IDDescription
Paelopatides33798-
Paelopatides33799-
Paelopatides33800REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN
Paelopatides33801PHAGE_INTEGRASE DOMAIN-CONTAINING PROTEIN
Paelopatides33802-
Paelopatides33803DNA REPAIR AND RECOMBINATION PROTEIN RAD52, RAD59
Paelopatides33804BARDET-BIEDL SYNDROME 2 PROTEIN
Paelopatides33805BARDET-BIEDL SYNDROME 2 PROTEIN
Paelopatides33806RIB43A-RELATED
Paelopatides33807CXC DOMAIN-CONTAINING PROTEIN-RELATED
Paelopatides33808-
Paelopatides33809-
Paelopatides33810-
Paelopatides33811BONUS, ISOFORM C-RELATED
Paelopatides33812GABA-B RECEPTOR
Paelopatides33813-
Paelopatides33814ENDO/EXONUCLEASE/PHOSPHATASE DOMAIN-CONTAINING PROTEIN
Paelopatides33815-
Paelopatides33816THIOESTERASE 1/PROTEASE 1/LYSOPHOSPHOLIPASE L1
Paelopatides33817ENDO/EXONUCLEASE/PHOSPHATASE DOMAIN-CONTAINING PROTEIN
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