About Paelopatides sp. Yap

The hadal sea cucumber Paelopatides sp. Yap is a species of hadal sea cucumber in the family Stichopodidae, collected from the Yap Trench in the western Pacific Ocean. This species is adapted to the extreme conditions of the hadal zone, thriving at great depths where pressures are immense and temperatures are near freezing. Its discovery contributes to our understanding of biodiversity and ecological dynamics in one of the least explored regions of the deep sea.

Classification

Animalia Kingdom; Echinodermata (Phylum); Holothuroidea (Class); Stichopodidae (Family); Paelopatides (Genus); Paelopatides sp. Yap (Species)


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Paelopatides sp. YapEchinodermataPaelopatides sp. YapDeep sea6,633Yap Trench at 8°1′22"N; 137°50′41"E-

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completeness (%)Scaffold/Contig N50 (kb)GC content (%)Repeat Rate (%)Gene Number
-3.7GbContig2020-Fujian Agriculture and Forestry UniversityPRJCA00378989.40 137.138.1976.0657,522

References
TitleJournalPubmed ID
The genome of a hadal sea cucumber reveals novel adaptive strategies to deep-sea environmentsiScience36444293

Gene Information

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Gene IDDescription
Paelopatides33838RETROTRANSPOSON
Paelopatides33839PHD-TYPE DOMAIN-CONTAINING PROTEIN
Paelopatides33840-
Paelopatides33841POL PROTEIN
Paelopatides33842PROTEIN, PUTATIVE-RELATED
Paelopatides33843SI:CH211-262H13.3-RELATED-RELATED
Paelopatides33844ENDO/EXONUCLEASE/PHOSPHATASE DOMAIN-CONTAINING PROTEIN
Paelopatides33845-
Paelopatides33846GTPASE, IMAP FAMILY MEMBER-RELATED
Paelopatides33847-
Paelopatides33854PROTEIN CBG26694
Paelopatides33855EXPRESSED PROTEIN
Paelopatides33856-
Paelopatides33857REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN
Paelopatides33858BUCENTAUR RELATED
Paelopatides33859RAS-ASSOCIATING DOMAIN-CONTAINING PROTEIN
Paelopatides33860CYCLINS
Paelopatides33861RNA-BINDING PROTEIN
Paelopatides33862RNA-BINDING PROTEIN
Paelopatides33863-
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