About Paelopatides sp. Yap

The hadal sea cucumber Paelopatides sp. Yap is a species of hadal sea cucumber in the family Stichopodidae, collected from the Yap Trench in the western Pacific Ocean. This species is adapted to the extreme conditions of the hadal zone, thriving at great depths where pressures are immense and temperatures are near freezing. Its discovery contributes to our understanding of biodiversity and ecological dynamics in one of the least explored regions of the deep sea.

Classification

Animalia Kingdom; Echinodermata (Phylum); Holothuroidea (Class); Stichopodidae (Family); Paelopatides (Genus); Paelopatides sp. Yap (Species)


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Paelopatides sp. YapEchinodermataPaelopatides sp. YapDeep sea6,633Yap Trench at 8°1′22"N; 137°50′41"E-

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completeness (%)Scaffold/Contig N50 (kb)GC content (%)Repeat Rate (%)Gene Number
-3.7GbContig2020-Fujian Agriculture and Forestry UniversityPRJCA00378989.40 137.138.1976.0657,522

References
TitleJournalPubmed ID
The genome of a hadal sea cucumber reveals novel adaptive strategies to deep-sea environmentsiScience36444293

Gene Information

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Gene IDDescription
Paelopatides33818ENDO/EXONUCLEASE/PHOSPHATASE DOMAIN-CONTAINING PROTEIN
Paelopatides33819-
Paelopatides33820-
Paelopatides33821TYROSINE-PROTEIN KINASE
Paelopatides33822FIBRINOGEN/TENASCIN/ANGIOPOEITIN
Paelopatides33823-
Paelopatides33824RHO GTPASE-ACTIVATING PROTEIN 68F
Paelopatides33825-
Paelopatides33826-
Paelopatides33827SCP160
Paelopatides33828ERO1-RELATED
Paelopatides33829FORMIN
Paelopatides33830FTP DOMAIN-CONTAINING PROTEIN
Paelopatides33831NG5
Paelopatides33832PROTEIN CBG23806
Paelopatides33833-
Paelopatides33834-
Paelopatides33835-
Paelopatides33836ZGC:195170
Paelopatides33837-
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