About Paelopatides sp. Yap

The hadal sea cucumber Paelopatides sp. Yap is a species of hadal sea cucumber in the family Stichopodidae, collected from the Yap Trench in the western Pacific Ocean. This species is adapted to the extreme conditions of the hadal zone, thriving at great depths where pressures are immense and temperatures are near freezing. Its discovery contributes to our understanding of biodiversity and ecological dynamics in one of the least explored regions of the deep sea.

Classification

Animalia Kingdom; Echinodermata (Phylum); Holothuroidea (Class); Stichopodidae (Family); Paelopatides (Genus); Paelopatides sp. Yap (Species)


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Paelopatides sp. YapEchinodermataPaelopatides sp. YapDeep sea6,633Yap Trench at 8°1′22"N; 137°50′41"E-

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completeness (%)Scaffold/Contig N50 (kb)GC content (%)Repeat Rate (%)Gene Number
-3.7GbContig2020-Fujian Agriculture and Forestry UniversityPRJCA00378989.40 137.138.1976.0657,522

References
TitleJournalPubmed ID
The genome of a hadal sea cucumber reveals novel adaptive strategies to deep-sea environmentsiScience36444293

Gene Information

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Gene IDDescription
Paelopatides33735REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN
Paelopatides33736DNAJ HOMOLOG SUBFAMILY C MEMBER 4
Paelopatides33737-
Paelopatides33738SECRETED MODULAR CALCIUM-BINDING PROTEIN
Paelopatides33739REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN
Paelopatides33740WD REPEAT-CONTAINING PROTEIN 27
Paelopatides33741-
Paelopatides33742MACROGLOBULIN / COMPLEMENT
Paelopatides33743-
Paelopatides33744UNCHARACTERIZED
Paelopatides33745ZGC:174356
Paelopatides3374650S RIBOSOMAL PROTEIN L4
Paelopatides33747-
Paelopatides3374850S RIBOSOMAL PROTEIN L4
Paelopatides33750-
Paelopatides33751COX ASSEMBLY MITOCHONDRIAL PROTEIN
Paelopatides33752-
Paelopatides33753-
Paelopatides33754REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN
Paelopatides33755SMOOTH MUSCLE MYOSIN HEAVY CHAIN-RELATED
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