About Paelopatides sp. Yap

The hadal sea cucumber Paelopatides sp. Yap is a species of hadal sea cucumber in the family Stichopodidae, collected from the Yap Trench in the western Pacific Ocean. This species is adapted to the extreme conditions of the hadal zone, thriving at great depths where pressures are immense and temperatures are near freezing. Its discovery contributes to our understanding of biodiversity and ecological dynamics in one of the least explored regions of the deep sea.

Classification

Animalia Kingdom; Echinodermata (Phylum); Holothuroidea (Class); Stichopodidae (Family); Paelopatides (Genus); Paelopatides sp. Yap (Species)


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Paelopatides sp. YapEchinodermataPaelopatides sp. YapDeep sea6,633Yap Trench at 8°1′22"N; 137°50′41"E-

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completeness (%)Scaffold/Contig N50 (kb)GC content (%)Repeat Rate (%)Gene Number
-3.7GbContig2020-Fujian Agriculture and Forestry UniversityPRJCA00378989.40 137.138.1976.0657,522

References
TitleJournalPubmed ID
The genome of a hadal sea cucumber reveals novel adaptive strategies to deep-sea environmentsiScience36444293

Gene Information

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Gene IDDescription
Paelopatides33886SODIUM/NUCLEOSIDE COTRANSPORTER
Paelopatides33887-
Paelopatides33888OBG GTPASE FAMILY
Paelopatides33889-
Paelopatides33890-
Paelopatides33891METHYL-CPG BINDING PROTEIN, DROSOPHILA
Paelopatides33892NAZO FAMILY MEMBER
Paelopatides33893ENDO/EXONUCLEASE/PHOSPHATASE DOMAIN-CONTAINING PROTEIN
Paelopatides33894PHD-TYPE DOMAIN-CONTAINING PROTEIN
Paelopatides33895SI:CH211-108C17.2-RELATED-RELATED
Paelopatides33896TRACE AMINE-ASSOCIATED RECEPTOR 19N-RELATED
Paelopatides33897-
Paelopatides33898ASPARTYL PROTEASE-RELATED
Paelopatides33899BUCENTAUR RELATED
Paelopatides33900-
Paelopatides33901L1 TRANSPOSABLE ELEMENT-RELATED
Paelopatides33902DENN DOMAIN-CONTAINING PROTEIN 2
Paelopatides33903PIGGYBAC TRANSPOSABLE ELEMENT-DERIVED PROTEIN 4
Paelopatides33904PIGGYBAC TRANSPOSABLE ELEMENT-DERIVED PROTEIN 4
Paelopatides33905-
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