About Paelopatides sp. Yap

The hadal sea cucumber Paelopatides sp. Yap is a species of hadal sea cucumber in the family Stichopodidae, collected from the Yap Trench in the western Pacific Ocean. This species is adapted to the extreme conditions of the hadal zone, thriving at great depths where pressures are immense and temperatures are near freezing. Its discovery contributes to our understanding of biodiversity and ecological dynamics in one of the least explored regions of the deep sea.

Classification

Animalia Kingdom; Echinodermata (Phylum); Holothuroidea (Class); Stichopodidae (Family); Paelopatides (Genus); Paelopatides sp. Yap (Species)


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Paelopatides sp. YapEchinodermataPaelopatides sp. YapDeep sea6,633Yap Trench at 8°1′22"N; 137°50′41"E-

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completeness (%)Scaffold/Contig N50 (kb)GC content (%)Repeat Rate (%)Gene Number
-3.7GbContig2020-Fujian Agriculture and Forestry UniversityPRJCA00378989.40 137.138.1976.0657,522

References
TitleJournalPubmed ID
The genome of a hadal sea cucumber reveals novel adaptive strategies to deep-sea environmentsiScience36444293

Gene Information

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Gene IDDescription
Paelopatides34097GALACTOSE-3-O-SULFOTRANSFERASE
Paelopatides34098UNCHARACTERIZED
Paelopatides34099UNCHARACTERIZED
Paelopatides341004-HYDROXYBENZOYL-COA THIOESTERASE FAMILY MEMBER
Paelopatides34101CRYPTOCHROME
Paelopatides34102PARANEOPLASTIC ANTIGEN
Paelopatides34103-
Paelopatides34104-
Paelopatides34105MANNOSE, PHOSPHOLIPASE, LECTIN RECEPTOR RELATED
Paelopatides34106-
Paelopatides34107NEURALIZED
Paelopatides34108-
Paelopatides34109REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN
Paelopatides34110BUCENTAUR RELATED
Paelopatides34111G DOMAIN-CONTAINING PROTEIN
Paelopatides34112L1 TRANSPOSABLE ELEMENT-RELATED
Paelopatides34113-
Paelopatides34114PHAGE_INTEGRASE DOMAIN-CONTAINING PROTEIN
Paelopatides34115-
Paelopatides34116APICAL ENDOSOMAL GLYCOPROTEIN PRECURSOR.
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