About Paelopatides sp. Yap

The hadal sea cucumber Paelopatides sp. Yap is a species of hadal sea cucumber in the family Stichopodidae, collected from the Yap Trench in the western Pacific Ocean. This species is adapted to the extreme conditions of the hadal zone, thriving at great depths where pressures are immense and temperatures are near freezing. Its discovery contributes to our understanding of biodiversity and ecological dynamics in one of the least explored regions of the deep sea.

Classification

Animalia Kingdom; Echinodermata (Phylum); Holothuroidea (Class); Stichopodidae (Family); Paelopatides (Genus); Paelopatides sp. Yap (Species)


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Paelopatides sp. YapEchinodermataPaelopatides sp. YapDeep sea6,633Yap Trench at 8°1′22"N; 137°50′41"E-

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completeness (%)Scaffold/Contig N50 (kb)GC content (%)Repeat Rate (%)Gene Number
-3.7GbContig2020-Fujian Agriculture and Forestry UniversityPRJCA00378989.40 137.138.1976.0657,522

References
TitleJournalPubmed ID
The genome of a hadal sea cucumber reveals novel adaptive strategies to deep-sea environmentsiScience36444293

Gene Information

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Gene IDDescription
Paelopatides33906-
Paelopatides3390760S RIBOSOMAL PROTEIN L27A
Paelopatides33908TRANSPOSABLE ELEMENT-RELATED
Paelopatides33909BONUS, ISOFORM C-RELATED
Paelopatides33910ENDONUCLEASE-RELATED
Paelopatides33911RHO GTPASE ACTIVATING PROTEIN 18,19-RELATED
Paelopatides33912-
Paelopatides33913CHITIN-BINDING TYPE-4 DOMAIN-CONTAINING PROTEIN
Paelopatides33914-
Paelopatides33915FIBRONECTIN TYPE-III DOMAIN-CONTAINING PROTEIN-RELATED
Paelopatides33916PROTEIN KINASE DOMAIN-CONTAINING PROTEIN
Paelopatides33917SIGNALING LYMPHOCYTIC ACTIVATION MOLECULE
Paelopatides33918-
Paelopatides33919-
Paelopatides33920NACHT DOMAIN-CONTAINING PROTEIN
Paelopatides33921-
Paelopatides33922IQ DOMAIN-CONTAINING PROTEIN C
Paelopatides33923TYROSINE-PROTEIN KINASE RECEPTOR
Paelopatides33924TYROSINE-PROTEIN KINASE
Paelopatides33926XYLOSYLTRANSFERASE OXT
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