About Paelopatides sp. Yap

The hadal sea cucumber Paelopatides sp. Yap is a species of hadal sea cucumber in the family Stichopodidae, collected from the Yap Trench in the western Pacific Ocean. This species is adapted to the extreme conditions of the hadal zone, thriving at great depths where pressures are immense and temperatures are near freezing. Its discovery contributes to our understanding of biodiversity and ecological dynamics in one of the least explored regions of the deep sea.

Classification

Animalia Kingdom; Echinodermata (Phylum); Holothuroidea (Class); Stichopodidae (Family); Paelopatides (Genus); Paelopatides sp. Yap (Species)


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Paelopatides sp. YapEchinodermataPaelopatides sp. YapDeep sea6,633Yap Trench at 8°1′22"N; 137°50′41"E-

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completeness (%)Scaffold/Contig N50 (kb)GC content (%)Repeat Rate (%)Gene Number
-3.7GbContig2020-Fujian Agriculture and Forestry UniversityPRJCA00378989.40 137.138.1976.0657,522

References
TitleJournalPubmed ID
The genome of a hadal sea cucumber reveals novel adaptive strategies to deep-sea environmentsiScience36444293

Gene Information

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Gene IDDescription
Paelopatides33947FI04643P-RELATED
Paelopatides33948VITELLOGENIN RECEPTOR-LIKE PROTEIN-RELATED-RELATED
Paelopatides33949-
Paelopatides3395052 KDA REPRESSOR OF THE INHIBITOR OF THE PROTEIN KINASE-LIKE PROTEIN-RELATED
Paelopatides33951BCDNA.GH03377
Paelopatides33952-
Paelopatides33953PIGGYBAC TRANSPOSABLE ELEMENT-DERIVED PROTEIN 4
Paelopatides33954SH3 DOMAIN-CONTAINING
Paelopatides33955RNA HELICASE
Paelopatides33956SPLICING FACTOR U2AF-ASSOCIATED PROTEIN 2
Paelopatides33957SPLICING FACTOR U2AF-ASSOCIATED PROTEIN 2
Paelopatides33958TRANSCRIPTION COFACTOR VESTIGIAL-LIKE PROTEIN
Paelopatides33959-
Paelopatides33960ENZYMATIC POLYPROTEIN-RELATED
Paelopatides33961PROTEIN CBG26694
Paelopatides33962-
Paelopatides33963PHAGE_INTEGRASE DOMAIN-CONTAINING PROTEIN
Paelopatides33964ANK_REP_REGION DOMAIN-CONTAINING PROTEIN-RELATED
Paelopatides33965UNCHARACTERIZED
Paelopatides33966G-PROTEIN COUPLED RECEPTOR MTH-LIKE 1-RELATED
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