About Paelopatides sp. Yap

The hadal sea cucumber Paelopatides sp. Yap is a species of hadal sea cucumber in the family Stichopodidae, collected from the Yap Trench in the western Pacific Ocean. This species is adapted to the extreme conditions of the hadal zone, thriving at great depths where pressures are immense and temperatures are near freezing. Its discovery contributes to our understanding of biodiversity and ecological dynamics in one of the least explored regions of the deep sea.

Classification

Animalia Kingdom; Echinodermata (Phylum); Holothuroidea (Class); Stichopodidae (Family); Paelopatides (Genus); Paelopatides sp. Yap (Species)


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Paelopatides sp. YapEchinodermataPaelopatides sp. YapDeep sea6,633Yap Trench at 8°1′22"N; 137°50′41"E-

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completeness (%)Scaffold/Contig N50 (kb)GC content (%)Repeat Rate (%)Gene Number
-3.7GbContig2020-Fujian Agriculture and Forestry UniversityPRJCA00378989.40 137.138.1976.0657,522

References
TitleJournalPubmed ID
The genome of a hadal sea cucumber reveals novel adaptive strategies to deep-sea environmentsiScience36444293

Gene Information

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Gene IDDescription
Paelopatides34157CXC DOMAIN-CONTAINING PROTEIN-RELATED
Paelopatides34158ENDO/EXONUCLEASE/PHOSPHATASE DOMAIN-CONTAINING PROTEIN
Paelopatides34159REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN
Paelopatides34161-
Paelopatides34162ENDO/EXONUCLEASE/PHOSPHATASE DOMAIN-CONTAINING PROTEIN
Paelopatides34163TRANS-SULFURATION ENZYME FAMILY MEMBER
Paelopatides34164UNC-93 RELATED
Paelopatides34165G-PROTEIN COUPLED RECEPTOR 158-RELATED
Paelopatides34166GTPASE, IMAP FAMILY MEMBER-RELATED
Paelopatides34167ZINC KNUCKLE DOMAINCONTAINING PROTEIN-RELATED
Paelopatides34168PROTEIN CBG26694
Paelopatides34169CWF19, CELL CYCLE CONTROL PROTEIN
Paelopatides34170-
Paelopatides34171-
Paelopatides34172NADH-UBIQUINONE OXIDOREDUCTASE SUBUNIT
Paelopatides34173UNCHARACTERIZED
Paelopatides34174-
Paelopatides34175-
Paelopatides34176-
Paelopatides34177PROLYL 4-HYDROXYLASE ALPHA SUBUNIT
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