About Paelopatides sp. Yap

The hadal sea cucumber Paelopatides sp. Yap is a species of hadal sea cucumber in the family Stichopodidae, collected from the Yap Trench in the western Pacific Ocean. This species is adapted to the extreme conditions of the hadal zone, thriving at great depths where pressures are immense and temperatures are near freezing. Its discovery contributes to our understanding of biodiversity and ecological dynamics in one of the least explored regions of the deep sea.

Classification

Animalia Kingdom; Echinodermata (Phylum); Holothuroidea (Class); Stichopodidae (Family); Paelopatides (Genus); Paelopatides sp. Yap (Species)


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Paelopatides sp. YapEchinodermataPaelopatides sp. YapDeep sea6,633Yap Trench at 8°1′22"N; 137°50′41"E-

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completeness (%)Scaffold/Contig N50 (kb)GC content (%)Repeat Rate (%)Gene Number
-3.7GbContig2020-Fujian Agriculture and Forestry UniversityPRJCA00378989.40 137.138.1976.0657,522

References
TitleJournalPubmed ID
The genome of a hadal sea cucumber reveals novel adaptive strategies to deep-sea environmentsiScience36444293

Gene Information

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Gene IDDescription
Paelopatides34117-
Paelopatides34118-
Paelopatides34119-
Paelopatides34120CRUMBS FAMILY MEMBER
Paelopatides34121-
Paelopatides34122-
Paelopatides34123-
Paelopatides34124MUCIN 12EA-RELATED
Paelopatides34125DISCS LARGE
Paelopatides34126PIGGYBAC TRANSPOSABLE ELEMENT-DERIVED PROTEIN 4
Paelopatides34127EPM2A-INTERACTING PROTEIN 1
Paelopatides34128IP01015P-RELATED
Paelopatides34129-
Paelopatides34130FINGER PUTATIVE TRANSCRIPTION FACTOR FAMILY-RELATED
Paelopatides34131-
Paelopatides34132T-SNARE COILED-COIL HOMOLOGY DOMAIN-CONTAINING PROTEIN
Paelopatides34133ENZYMATIC POLYPROTEIN-RELATED
Paelopatides34134ENDONUCLEASE-RELATED
Paelopatides34135EXPRESSED PROTEIN
Paelopatides34136-
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