About Paelopatides sp. Yap

The hadal sea cucumber Paelopatides sp. Yap is a species of hadal sea cucumber in the family Stichopodidae, collected from the Yap Trench in the western Pacific Ocean. This species is adapted to the extreme conditions of the hadal zone, thriving at great depths where pressures are immense and temperatures are near freezing. Its discovery contributes to our understanding of biodiversity and ecological dynamics in one of the least explored regions of the deep sea.

Classification

Animalia Kingdom; Echinodermata (Phylum); Holothuroidea (Class); Stichopodidae (Family); Paelopatides (Genus); Paelopatides sp. Yap (Species)


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Paelopatides sp. YapEchinodermataPaelopatides sp. YapDeep sea6,633Yap Trench at 8°1′22"N; 137°50′41"E-

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completeness (%)Scaffold/Contig N50 (kb)GC content (%)Repeat Rate (%)Gene Number
-3.7GbContig2020-Fujian Agriculture and Forestry UniversityPRJCA00378989.40 137.138.1976.0657,522

References
TitleJournalPubmed ID
The genome of a hadal sea cucumber reveals novel adaptive strategies to deep-sea environmentsiScience36444293

Gene Information

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Gene IDDescription
Paelopatides33927-
Paelopatides33928-
Paelopatides33929-
Paelopatides33930-
Paelopatides33931-
Paelopatides33932-
Paelopatides33933TRANSMEMBRANE ANCHOR PROTEIN 1
Paelopatides33934PROTEIN FAM227B
Paelopatides33935PROTEIN CBR-CLEC-78
Paelopatides33936MUCIN 4-RELATED
Paelopatides33937-
Paelopatides33938IGGFC_BINDING DOMAIN-CONTAINING PROTEIN
Paelopatides33939MUCIN 4-RELATED
Paelopatides33940UNCHARACTERIZED
Paelopatides33941ENDO/EXONUCLEASE/PHOSPHATASE DOMAIN-CONTAINING PROTEIN
Paelopatides33942CTX-RELATED TYPE I TRANSMEMBRANE PROTEIN
Paelopatides33943ADHESION G PROTEIN-COUPLED RECEPTOR G7
Paelopatides33944ADHESION G PROTEIN-COUPLED RECEPTOR G7
Paelopatides33945DUF614 FAMILY PROTEIN-RELATED
Paelopatides33946VITELLOGENIN RECEPTOR-LIKE PROTEIN-RELATED-RELATED
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