About Paelopatides sp. Yap

The hadal sea cucumber Paelopatides sp. Yap is a species of hadal sea cucumber in the family Stichopodidae, collected from the Yap Trench in the western Pacific Ocean. This species is adapted to the extreme conditions of the hadal zone, thriving at great depths where pressures are immense and temperatures are near freezing. Its discovery contributes to our understanding of biodiversity and ecological dynamics in one of the least explored regions of the deep sea.

Classification

Animalia Kingdom; Echinodermata (Phylum); Holothuroidea (Class); Stichopodidae (Family); Paelopatides (Genus); Paelopatides sp. Yap (Species)


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Paelopatides sp. YapEchinodermataPaelopatides sp. YapDeep sea6,633Yap Trench at 8°1′22"N; 137°50′41"E-

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completeness (%)Scaffold/Contig N50 (kb)GC content (%)Repeat Rate (%)Gene Number
-3.7GbContig2020-Fujian Agriculture and Forestry UniversityPRJCA00378989.40 137.138.1976.0657,522

References
TitleJournalPubmed ID
The genome of a hadal sea cucumber reveals novel adaptive strategies to deep-sea environmentsiScience36444293

Gene Information

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Gene IDDescription
Paelopatides34532-
Paelopatides34533ADENOSINE KINASE
Paelopatides34534PROTEIN CBG26694
Paelopatides34535TRANSPOSON TY3-I GAG-POL POLYPROTEIN
Paelopatides34536ADENOSINE KINASE
Paelopatides34537ADENOSINE KINASE
Paelopatides34538ADENOSINE KINASE
Paelopatides34539PHENAZINE BIOSYNTHESIS PROTEIN
Paelopatides34540PHENAZINE BIOSYNTHESIS PROTEIN
Paelopatides34541REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN
Paelopatides34542ADENOSINE KINASE
Paelopatides34543ELONGATOR COMPLEX PROTEIN 5
Paelopatides34544-
Paelopatides34545CATION-TRANSPORTING ATPASE-RELATED
Paelopatides34546CATION-TRANSPORTING ATPASE-RELATED
Paelopatides34547COILED-COIL-HELIX-COILED-COIL-HELIX DOMAIN-CONTAINING PROTEIN 5
Paelopatides34548DRAB11-RELATED
Paelopatides34549COILED-COIL DOMAIN-CONTAINING PROTEIN 105
Paelopatides34550GOLGIN SUBFAMILY A MEMBER-RELATED
Paelopatides34551ATP-DEPENDENT RNA AND DNA HELICASE
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