About Paelopatides sp. Yap

The hadal sea cucumber Paelopatides sp. Yap is a species of hadal sea cucumber in the family Stichopodidae, collected from the Yap Trench in the western Pacific Ocean. This species is adapted to the extreme conditions of the hadal zone, thriving at great depths where pressures are immense and temperatures are near freezing. Its discovery contributes to our understanding of biodiversity and ecological dynamics in one of the least explored regions of the deep sea.

Classification

Animalia Kingdom; Echinodermata (Phylum); Holothuroidea (Class); Stichopodidae (Family); Paelopatides (Genus); Paelopatides sp. Yap (Species)


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Paelopatides sp. YapEchinodermataPaelopatides sp. YapDeep sea6,633Yap Trench at 8°1′22"N; 137°50′41"E-

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completeness (%)Scaffold/Contig N50 (kb)GC content (%)Repeat Rate (%)Gene Number
-3.7GbContig2020-Fujian Agriculture and Forestry UniversityPRJCA00378989.40 137.138.1976.0657,522

References
TitleJournalPubmed ID
The genome of a hadal sea cucumber reveals novel adaptive strategies to deep-sea environmentsiScience36444293

Gene Information

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Gene IDDescription
Paelopatides34552-
Paelopatides34553MORN REPEAT-CONTAINING PROTEIN 5
Paelopatides34554PAR-6-RELATED
Paelopatides34555-
Paelopatides34556-
Paelopatides34557MANNOSE, PHOSPHOLIPASE, LECTIN RECEPTOR RELATED
Paelopatides34558ENDO/EXONUCLEASE/PHOSPHATASE DOMAIN-CONTAINING PROTEIN
Paelopatides34559-
Paelopatides34560-
Paelopatides34561BUCENTAUR RELATED
Paelopatides34562-
Paelopatides34563-
Paelopatides34564-
Paelopatides34565PROTEIN CBG26694
Paelopatides34566REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN
Paelopatides34567ANK_REP_REGION DOMAIN-CONTAINING PROTEIN-RELATED
Paelopatides34568BUCENTAUR RELATED
Paelopatides34569ENDO/EXONUCLEASE/PHOSPHATASE DOMAIN-CONTAINING PROTEIN
Paelopatides34570ENDO/EXONUCLEASE/PHOSPHATASE DOMAIN-CONTAINING PROTEIN
Paelopatides34571-
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