About Paelopatides sp. Yap

The hadal sea cucumber Paelopatides sp. Yap is a species of hadal sea cucumber in the family Stichopodidae, collected from the Yap Trench in the western Pacific Ocean. This species is adapted to the extreme conditions of the hadal zone, thriving at great depths where pressures are immense and temperatures are near freezing. Its discovery contributes to our understanding of biodiversity and ecological dynamics in one of the least explored regions of the deep sea.

Classification

Animalia Kingdom; Echinodermata (Phylum); Holothuroidea (Class); Stichopodidae (Family); Paelopatides (Genus); Paelopatides sp. Yap (Species)


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Paelopatides sp. YapEchinodermataPaelopatides sp. YapDeep sea6,633Yap Trench at 8°1′22"N; 137°50′41"E-

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completeness (%)Scaffold/Contig N50 (kb)GC content (%)Repeat Rate (%)Gene Number
-3.7GbContig2020-Fujian Agriculture and Forestry UniversityPRJCA00378989.40 137.138.1976.0657,522

References
TitleJournalPubmed ID
The genome of a hadal sea cucumber reveals novel adaptive strategies to deep-sea environmentsiScience36444293

Gene Information

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Gene IDDescription
Paelopatides34572UPF0598 PROTEIN C8ORF82
Paelopatides34573-
Paelopatides34574UBIQUITIN-CONJUGATING ENZYME E2
Paelopatides34575-
Paelopatides34576TRNA-DIHYDROURIDINE(20) SYNTHASE [NAD(P)+]-LIKE
Paelopatides34577-
Paelopatides34578TRNA-DIHYDROURIDINE(20) SYNTHASE [NAD(P)+]-LIKE
Paelopatides34579TRNA-DIHYDROURIDINE(20) SYNTHASE [NAD(P)+]-LIKE
Paelopatides34580-
Paelopatides34581-
Paelopatides34582-
Paelopatides34583-
Paelopatides34584-
Paelopatides34585ORIGIN RECOGNITION COMPLEX SUBUNIT 6
Paelopatides34586PROTEASE FAMILY C15 PYROGLUTAMYL-PEPTIDASE I-RELATED
Paelopatides34587HEN1
Paelopatides34588-
Paelopatides34589-
Paelopatides34590-
Paelopatides34591SRCR DOMAIN-CONTAINING PROTEIN
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