About Paelopatides sp. Yap

The hadal sea cucumber Paelopatides sp. Yap is a species of hadal sea cucumber in the family Stichopodidae, collected from the Yap Trench in the western Pacific Ocean. This species is adapted to the extreme conditions of the hadal zone, thriving at great depths where pressures are immense and temperatures are near freezing. Its discovery contributes to our understanding of biodiversity and ecological dynamics in one of the least explored regions of the deep sea.

Classification

Animalia Kingdom; Echinodermata (Phylum); Holothuroidea (Class); Stichopodidae (Family); Paelopatides (Genus); Paelopatides sp. Yap (Species)


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Paelopatides sp. YapEchinodermataPaelopatides sp. YapDeep sea6,633Yap Trench at 8°1′22"N; 137°50′41"E-

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completeness (%)Scaffold/Contig N50 (kb)GC content (%)Repeat Rate (%)Gene Number
-3.7GbContig2020-Fujian Agriculture and Forestry UniversityPRJCA00378989.40 137.138.1976.0657,522

References
TitleJournalPubmed ID
The genome of a hadal sea cucumber reveals novel adaptive strategies to deep-sea environmentsiScience36444293

Gene Information

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Gene IDDescription
Paelopatides34592EUKARYOTIC TRANSLATION INITIATION FACTOR
Paelopatides34593-
Paelopatides34594ZINC FINGER PROTEIN
Paelopatides3459560S RIBOSOMAL PROTEIN L17
Paelopatides34596SODIUM/POTASSIUM/CALCIUM EXCHANGER
Paelopatides34597PROTEIN CBG26694
Paelopatides34598-
Paelopatides34599-
Paelopatides34600-
Paelopatides34601EARLY GAMETOCYTE ENRICHED PHOSPHOPROTEIN EGXP
Paelopatides34603SCAVENGER RECEPTOR CLASS B TYPE-1 SR-B1
Paelopatides34604-
Paelopatides34605-
Paelopatides34606MYELIN PROTEOLIPID
Paelopatides34607HEPARAN SULFATE 2-O-SULFOTRANSFERASE
Paelopatides34608CYSTEINE PROTEASE FAMILY C1-RELATED
Paelopatides34609-
Paelopatides34610-
Paelopatides34611-
Paelopatides34612PHD-TYPE DOMAIN-CONTAINING PROTEIN
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