About Paelopatides sp. Yap

The hadal sea cucumber Paelopatides sp. Yap is a species of hadal sea cucumber in the family Stichopodidae, collected from the Yap Trench in the western Pacific Ocean. This species is adapted to the extreme conditions of the hadal zone, thriving at great depths where pressures are immense and temperatures are near freezing. Its discovery contributes to our understanding of biodiversity and ecological dynamics in one of the least explored regions of the deep sea.

Classification

Animalia Kingdom; Echinodermata (Phylum); Holothuroidea (Class); Stichopodidae (Family); Paelopatides (Genus); Paelopatides sp. Yap (Species)


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Paelopatides sp. YapEchinodermataPaelopatides sp. YapDeep sea6,633Yap Trench at 8°1′22"N; 137°50′41"E-

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completeness (%)Scaffold/Contig N50 (kb)GC content (%)Repeat Rate (%)Gene Number
-3.7GbContig2020-Fujian Agriculture and Forestry UniversityPRJCA00378989.40 137.138.1976.0657,522

References
TitleJournalPubmed ID
The genome of a hadal sea cucumber reveals novel adaptive strategies to deep-sea environmentsiScience36444293

Gene Information

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Gene IDDescription
Paelopatides34776-
Paelopatides34785-
Paelopatides34786-
Paelopatides34787-
Paelopatides34788-
Paelopatides34789CYTOKINE RECEPTOR
Paelopatides34790INHIBITOR OF GROWTH PROTEIN
Paelopatides34791PHAGE_INTEGRASE DOMAIN-CONTAINING PROTEIN
Paelopatides34792-
Paelopatides34793CYTOCHROME P450 508A4-RELATED
Paelopatides34794COILED-COIL DOMAIN-CONTAINING PROTEIN 150
Paelopatides34795COILED-COIL DOMAIN-CONTAINING PROTEIN 150
Paelopatides34796PROTEIN CBG26694
Paelopatides34797EPM2A-INTERACTING PROTEIN 1
Paelopatides34798FIBRINOGEN/TENASCIN/ANGIOPOEITIN
Paelopatides34799POL PROTEIN
Paelopatides34800FIBRINOGEN/TENASCIN/ANGIOPOEITIN
Paelopatides34801-
Paelopatides34802PELOTA
Paelopatides34803FIBRINOGEN/TENASCIN/ANGIOPOEITIN
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